DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1824 and haf-3

DIOPT Version :9

Sequence 1:NP_572810.1 Gene:CG1824 / 32208 FlyBaseID:FBgn0030403 Length:761 Species:Drosophila melanogaster
Sequence 2:NP_506927.2 Gene:haf-3 / 180056 WormBaseID:WBGene00001813 Length:666 Species:Caenorhabditis elegans


Alignment Length:615 Identity:219/615 - (35%)
Similarity:338/615 - (54%) Gaps:35/615 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   106 EEEEDTASEQHFDWKRLWTYLE---PHLWELIGAVCAALIVAYINIRIPNLLGDLVNTLARYANT 167
            |.:.::...::..||.|...|.   |:.|.::..:....|.:.|.:..|.:||.|::   .:..|
 Worm    57 ETKRESYKLKNASWKDLKAILSLAGPYKWRIMLGISFLGISSSIFLFTPRVLGKLID---EWDET 118

  Fly   168 Y--VMDPINNS-----FVKDVSKPASNLLSLYMLQSGFTFMYIYLLSRVGEQMAAKMRQDLFTQI 225
            .  .|||.:.:     |.|:  .|.: |..::||.:......||.:...|:.:...:|:.:|..:
 Worm   119 KQDKMDPNDKALLLARFFKE--NPIA-LAGVFMLGAIAIAARIYCMHTAGQLVINDLRKSVFNSV 180

  Fly   226 VVQDIAFFDENRTGELVNRLTADVQDFKTSFKQFVSQGLRSAAQLIGGSISLFMISPHMAAIALA 290
            :.||:||||:|:.||:|:||:.|......|....:|.|.|:.....|....:...|..|..:...
 Worm   181 LRQDMAFFDKNKVGEIVSRLSTDALIVGYSVSMNLSDGARALITCFGSGGLMVYTSLAMCKVIFV 245

  Fly   291 SVPCVVMFMTYLGKKLRSLSKSSQAQAERATGVCEEALSNIRTVRSSACEYREMQLFEAETNEAA 355
            .||.:|......||..|..:...|.....|..|..|.||::||||....|.:|:..:..:.||..
 Worm   246 VVPVIVGTFAVFGKLQRKYTLMMQEAVAGANQVATERLSSVRTVRMLVAERKELAAYSDKINEIW 310

  Fly   356 RLAQKLGYGIAIFQGLTNFFLNTLVLSTLFMGGHLMSTESLSPGALMAF---LVASQGVQRSLAQ 417
            ::::|.|.......|...|.....:.|.||.|.:|:|...|:.|.|.:|   .|.|.|   ||:.
 Worm   311 QISKKEGLAKGFMFGSFQFTGYLALSSILFYGSNLISQGLLTYGELSSFCLYAVLSAG---SLSA 372

  Fly   418 GSILLGTMIRGMSAGSRVFEFLSLQPQVELLRGYIIPQERLHGEIRFENVSFAYPMQPDHLVLKD 482
            .|.....:::|:.|.||:||..:.:|::.|..|..|  ..:...||||:|:|.|..:..  :..:
 Worm   373 MSGFYLELMKGLGASSRLFELKNREPRIPLEGGVQI--GNVKDTIRFEHVAFGYADRDP--LFHN 433

  Fly   483 FSLTLRPGQTVALVGASGSGKSTIASLVERFYEPSAGNIKLDGYKLSDISP-YWLRSNVLGFIEQ 546
            .|..:..|:..|:||:|||||||||||:.|.|:|::|.|.:||..|.||.| ||.|.  :|.:.|
 Worm   434 ISFDVPAGKITAVVGSSGSGKSTIASLLLRLYDPTSGRILVDGTDLKDIDPSYWRRH--IGTVGQ 496

  Fly   547 QPVLFGTSILENIRYG--KPD-AGEEDVYAAARLSQSHDFVTALPDGYATHVGERGTQLSGGQRQ 608
            :||||.|:|.|||.||  :|: ..:.::.:||..|.:.:|::..|..|.|.|||.|:.|||||:|
 Worm   497 EPVLFSTTIKENIIYGSLEPENVTDAEIVSAADQSNADEFISRFPIKYDTKVGEHGSTLSGGQKQ 561

  Fly   609 RIAIARALLKNPRILILDEATSALDATSEAEVQKALDTVVQN--RTTLVIAHRLSTIRNADLIVV 671
            ||||||||:..|.|||:|||||||||:||..|:.||:.::.|  :|.::||||||||::||.|||
 Worm   562 RIAIARALVNKPNILIMDEATSALDASSEYLVRIALNKLLANSKQTVMIIAHRLSTIKHADQIVV 626

  Fly   672 LDQGRVVETGKHDELMG-KRGLYFELVRQQ 700
            :|:|.|.|:|.:|||:. ..|::.:||.:|
 Worm   627 VDRGSVAESGSYDELIAIPDGIFRKLVEKQ 656

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1824NP_572810.1 MdlB 119..701 CDD:224055 218/602 (36%)
ABC_membrane 137..415 CDD:279056 78/287 (27%)
ABC_MTABC3_MDL1_MDL2 462..700 CDD:213216 120/244 (49%)
haf-3NP_506927.2 MdlB 70..657 CDD:224055 218/602 (36%)
ABC_membrane 96..366 CDD:279056 76/275 (28%)
P-loop_NTPase 415..656 CDD:304359 120/244 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0058
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54509
OrthoDB 1 1.010 - - D221577at33208
OrthoFinder 1 1.000 - - FOG0000243
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100059
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.730

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