DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1824 and haf-1

DIOPT Version :9

Sequence 1:NP_572810.1 Gene:CG1824 / 32208 FlyBaseID:FBgn0030403 Length:761 Species:Drosophila melanogaster
Sequence 2:NP_503098.2 Gene:haf-1 / 178522 WormBaseID:WBGene00001811 Length:677 Species:Caenorhabditis elegans


Alignment Length:645 Identity:208/645 - (32%)
Similarity:338/645 - (52%) Gaps:54/645 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   102 IRKEEEEEDTASEQHFDWK---RLWTYLEP-HLWELIGAVCAALIVAY-INIRIPNLLGDLVNTL 161
            ||:.:........:|..||   .|:...:| ..|..:|.  :.::|:. |.:.||.:||.|::..
 Worm    51 IRRVDRRNAAYLLRHTTWKDLVELYEIAKPFRKWIFLGT--SFMVVSSGIFLIIPRILGKLIDQF 113

  Fly   162 ARYANTYVM---DPINNSFVKDVSKPASNLLSLYMLQSGFTFMYIYLLSRVGEQMAAKMRQDLFT 223
            .  :||.|.   :.......|...:...:|:.|..:.:..|...:|.|...|..:...:|:.:::
 Worm   114 D--SNTGVQKAEEVFTMKIAKYFKEQPMSLVGLLAIGALATAAKVYCLQIAGVNIVGSLRKMVYS 176

  Fly   224 QIVVQDIAFFDENRTGELVNRLTADVQDFKTSFKQFVSQGLRSAAQLIG-GSIS-LFMISPHMAA 286
            .|:.||:.|||:|..||:.:|..||......|....:..|:|  |.|:| |||. :.|.|..::.
 Worm   177 SIIRQDMTFFDKNMVGEIGSRHAADTVIVGYSVSSSLRAGVR--AVLVGVGSIGMMLMTSLELST 239

  Fly   287 IALASVPCVVMFMTYLGKKLRSLSKSSQAQAERATGVCEEALSNIRTVR---------SSACEYR 342
            ::..:.|.|:......|:..:..:...|..|........|.::|::|:|         ...|:..
 Worm   240 VSFLTAPIVMGIFKMFGRVQQQCTWQLQEVAADVNQTAIERMANMKTIRMLSAEQQSIDEYCKKG 304

  Fly   343 EMQLFEAETNEAARLAQKLGYGIAIFQ--GLTNFFLNTLVLSTLFMGGHLMSTESLSPGALMAFL 405
            |:.|..::|...|:     |..|..||  |.:.|      .|.||.|.||::|..::.|.|.:|.
 Worm   305 ELVLDISKTEALAK-----GSLIGSFQFTGYSAF------SSILFYGSHLINTGHITYGELSSFC 358

  Fly   406 VASQGVQRSLAQGSILLGTMIRGMSAGSRVFEFLSLQPQVELLRGYIIPQERLHGEIRFENVSFA 470
            :.:.....||:..|.....:::|:.|.||:.|..:.||.:.|..|  |.:..:...|:|||||||
 Worm   359 LYAVLAAASLSNISGFYNEVMKGLGASSRLLELKNAQPIMNLNSG--IKKTDITTSIQFENVSFA 421

  Fly   471 YPMQPDHLVLKDFSLTLRPGQTVALVGASGSGKSTIASLVERFYEPSAGNIKLDGYKLSDISPYW 535
            |..:..  .|::.|..:..|:..|::|.||||||:||:|:.|.|:|:.|.:.:||..|.|::...
 Worm   422 YAGRKK--TLENISFDIPRGKITAVIGPSGSGKSSIANLMLRLYDPADGRVTVDGVDLRDLNATT 484

  Fly   536 LRSNVLGFIEQQPVLFGTSILENIRYG--KPD-AGEEDVYAAARLSQSHDFVTALPDGYATHVGE 597
            .| :.:|.:.|:||||..||.|||..|  .|: ..:.::..||:|:.:.||:....:|:.|.|||
 Worm   485 WR-HAIGTVGQEPVLFTCSIRENILMGTEHPEKVSQYELEEAAQLANALDFIQGFENGFETMVGE 548

  Fly   598 RGTQLSGGQRQRIAIARALLKNPRILILDEATSALDATSEAEVQKALDTVVQNR--TTLVIAHRL 660
            .|.:|||||:|||||||||:..|:|:|||||||||||||:..::..||.:::|.  |.|||||||
 Worm   549 HGCKLSGGQKQRIAIARALISKPKIMILDEATSALDATSDYLIRMTLDNLLKNHNLTVLVIAHRL 613

  Fly   661 STIRNADLIVVLDQGRVVETGKHDELMGKRGLYFELVRQQERR---DIQEQVQAVEDVVA 717
            :|::.||.:|.:::||:...|..||:|   .:...:|.|:.||   .:.||:..|...||
 Worm   614 ATMQQADQVVYVNRGRIEGQGTFDEMM---KIQNSIVEQEARRRGIPMNEQMSRVNTPVA 670

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1824NP_572810.1 MdlB 119..701 CDD:224055 198/607 (33%)
ABC_membrane 137..415 CDD:279056 71/294 (24%)
ABC_MTABC3_MDL1_MDL2 462..700 CDD:213216 107/242 (44%)
haf-1NP_503098.2 MdlB 82..641 CDD:224055 192/583 (33%)
ABC_membrane 93..363 CDD:294371 71/284 (25%)
P-loop_NTPase 413..641 CDD:304359 106/233 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0058
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54509
OrthoDB 1 1.010 - - D221577at33208
OrthoFinder 1 1.000 - - FOG0000243
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100059
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.730

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