DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1824 and pgp-1

DIOPT Version :10

Sequence 1:NP_572810.1 Gene:CG1824 / 32208 FlyBaseID:FBgn0030403 Length:761 Species:Drosophila melanogaster
Sequence 2:NP_502413.1 Gene:pgp-1 / 178215 WormBaseID:WBGene00003995 Length:1321 Species:Caenorhabditis elegans


Alignment Length:644 Identity:220/644 - (34%)
Similarity:336/644 - (52%) Gaps:70/644 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   144 AYINIRIPNLLGDLVNTLARYANTYVMDPINNSFVK-DVSKPASNLLSLY------MLQSGFTFM 201
            |:||.:|      ::|   ...:|::  |...::.| |......|::..|      |..:|...:
 Worm   104 AFINEQI------VIN---NNGSTFL--PTGQNYTKTDFEHDVMNVVWSYAAMTVGMWAAGQITV 157

  Fly   202 YIYLLSRVGEQMAAKMRQDLFTQIVVQDIAFFDENRTGELVNRLTADVQDFKTSFKQFVSQGLRS 266
            ..||.  |.|||..::|::....|:.|:|::||.|.:|.|..:|..:::..|......:....:.
 Worm   158 TCYLY--VAEQMNNRLRREFVKSILRQEISWFDTNHSGTLATKLFDNLERVKEGTGDKIGMAFQY 220

  Fly   267 AAQLIGGSISLFMISPHMAAIALASVPCVVMFMTYLGKKLRSLSKSSQAQAERATGVCEEALSNI 331
            .:|.|.|.|..|..|..:..:.||..|...:....:.|.:.:.:.....:..:|..|.||.:|:|
 Worm   221 LSQFITGFIVAFTHSWQLTLVMLAVTPIQALCGFAIAKSMSTFAIRETLRYAKAGKVVEETISSI 285

  Fly   332 RTVRS-SACEYREMQLFEAETNEAARLAQKLGYGIAIFQGL-------TNFFLNTLVLSTLFMGG 388
            |||.| :...| |::.:.....|    |:|.|....:|.|:       :||....|   ..::|.
 Worm   286 RTVVSLNGLRY-ELERYSTAVEE----AKKAGVLKGLFLGISFGAMQASNFISFAL---AFYIGV 342

  Fly   389 HLMSTESLSPGALMAFLVASQGVQRSLAQGSILLGTMIRGMS------------AGSRVFEFLSL 441
            ..:...||:.|.::...            .|:::|:|..|::            |.|.::|.|..
 Worm   343 GWVHDGSLNFGDMLTTF------------SSVMMGSMALGLAGPQLAVLGTAQGAASGIYEVLDR 395

  Fly   442 QPQVELLRGYIIPQERLHGEIRFENVSFAYPMQPDHLVLKDFSLTLRPGQTVALVGASGSGKSTI 506
            :|.::..........::.|:|..|||.|.||.:||..:|:..:|.:..||||||||:||.|||||
 Worm   396 KPVIDSSSKAGRKDMKIKGDITVENVHFTYPSRPDVPILRGMNLRVNAGQTVALVGSSGCGKSTI 460

  Fly   507 ASLVERFYEPSAGNIKLDGYKLSDISPYWLRSNVLGFIEQQPVLFGTSILENIRYGKPDAGEEDV 571
            .||:.|:|:...|.|.:||..:.||:..:||.|| ..:.|:|.||..:|.|||..||.....|::
 Worm   461 ISLLLRYYDVLKGKITIDGVDVRDINLEFLRKNV-AVVSQEPALFNCTIEENISLGKEGITREEM 524

  Fly   572 YAAARLSQSHDFVTALPDGYATHVGERGTQLSGGQRQRIAIARALLKNPRILILDEATSALDATS 636
            .||.:::.:..|:..||:||.|.||:|||||||||:|||||||||::||:||:||||||||||.|
 Worm   525 VAACKMANAEKFIKTLPNGYNTLVGDRGTQLSGGQKQRIAIARALVRNPKILLLDEATSALDAES 589

  Fly   637 EAEVQKALDTVVQNRTTLVIAHRLSTIRNADLIVVLDQGRVVETGKHDELMGKRGLYFELVRQQE 701
            |..||:|||...:.|||::||||||||||||||:....|:|||.|.|..||.::|||::||..|.
 Worm   590 EGIVQQALDKAAKGRTTIIIAHRLSTIRNADLIISCKNGQVVEVGDHRALMAQQGLYYDLVTAQT 654

  Fly   702 RRDIQEQVQAVEDVVAVK--EQQATATETSTAATIA-TAAETSAATVTVGSSSFGGRAN 757
            ..|      ||:.....|  .:.:.|.:||....:: .|:|.......|.||:.|...|
 Worm   655 FTD------AVDSAAEGKFSRENSVARQTSEHEGLSRQASEMDDIMNRVRSSTIGSITN 707

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1824NP_572810.1 MdlB 119..702 CDD:440747 206/584 (35%)
pgp-1NP_502413.1 MdlB 131..653 CDD:440747 196/544 (36%)
MdlB 733..1319 CDD:440747
Blue background indicates that the domain is not in the aligned region.

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