DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1824 and hmt-1

DIOPT Version :10

Sequence 1:NP_572810.1 Gene:CG1824 / 32208 FlyBaseID:FBgn0030403 Length:761 Species:Drosophila melanogaster
Sequence 2:NP_001022812.1 Gene:hmt-1 / 176540 WormBaseID:WBGene00001815 Length:801 Species:Caenorhabditis elegans


Alignment Length:667 Identity:184/667 - (27%)
Similarity:319/667 - (47%) Gaps:139/667 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   113 SEQHFDW----KRLWTYLEPHLW-------ELIGAVCAALIVAYINIRIPNLLGDLVNTLARYAN 166
            |.:...|    |::.| :.|::|       :|....|..|::          :|.|:|......:
 Worm   195 SSRESAWNNLSKKVVT-VAPYIWPTKSISLQLRVVFCLFLLI----------IGRLINVSLPILS 248

  Fly   167 TYVMDPINNSFVKDVSKPASNLLSLYMLQSGFTFMY-------------IYLLSRVGEQMAAKMR 218
            .:::|        :::.|.:...||..|.:...|:.             .||...:.:....::.
 Worm   249 KWIVD--------ELATPDTFQYSLLFLATFLKFLQGNGAMGGFLNTVRTYLWIPIQQYTTRELE 305

  Fly   219 QDLFTQIVVQDIAFFDENRTGELVNRLTADVQDFKTSFKQFVSQGLRSAAQLIGGSISLFMISPH 283
            .:||..:....:.:....:||:::               :.:.:|..|...::  :..||.:.|.
 Worm   306 VELFKHLHSLSLRWHLSRKTGQVL---------------RVMDRGTSSVNNIL--NYILFNVVPT 353

  Fly   284 MAAIALASVPCVVMFMTYLG----------------------KKLRSLSKSSQAQAERATGVCEE 326
            :|.|.:|.:.....|..|.|                      :.:|..::...|.:..||    :
 Worm   354 IADIVIAVIFFFSAFNAYFGLIVFGTMALYLTVTISITEWRTQYIREANEKDNATSAIAT----D 414

  Fly   327 ALSNIRTVRSSACEYREMQLFE--------AETNEAARLA-----QKLGYGIAIFQGLTNFFLNT 378
            :|.|..||:....|..|:..|:        .|....|.||     |....||.:..|  :.|:..
 Worm   415 SLINYETVKYYGNEEFEVNRFKNAIESYQVTEWKTQASLAFLNCLQNAIIGIGMIGG--SVFVVY 477

  Fly   379 LVL--STLFMGGHLMSTESLSPGALMAFLVASQGVQRSLAQGSILLGTMIRGMSAG----SRVFE 437
            :::  .||.:|.:::.|..|    |..:...:            ..||:.|.:...    ..:|:
 Worm   478 MIVHEKTLTVGDYVLFTTYL----LQLYTPLN------------FFGTIYRVIQKAFVDMENMFD 526

  Fly   438 FLSLQPQVELLRGYIIPQERLHGEIRFENVSFAY----PMQPDHLVLKDFSLTLRPGQTVALVGA 498
            .::.:.:|:.| .:.:|.....|.|..:|::|.|    |      |:|:.|..:..||||||||:
 Worm   527 LMNDEVEVKDL-PHALPYTDPRGTISVKNLTFEYNTGLP------VIKNISFEIGNGQTVALVGS 584

  Fly   499 SGSGKSTIASLVERFYEPSAGNIKLDGYKLSDISPYWLRSNVLGFIEQQPVLFGTSILENIRYGK 563
            |||||||:..|:.|.:|.:.|:|:.||..:.:.:.:.||..: |.:.|..|||..:|:.|||:|:
 Worm   585 SGSGKSTLIRLLFRLFESTEGSIEFDGIDVRNYTMHSLRQQI-GIVPQDTVLFNDTIMYNIRFGR 648

  Fly   564 PDAGEEDVYAAARLSQSHDFVTALPDGYATHVGERGTQLSGGQRQRIAIARALLKNPRILILDEA 628
            |||.:|:|..||:.:..|:.:|:||:||||.|||||.:||||::||:||||.:||.|:.:.||||
 Worm   649 PDASDEEVIEAAKAAMIHEKITSLPEGYATMVGERGLKLSGGEKQRVAIARTILKKPQFIFLDEA 713

  Fly   629 TSALDATSEAEVQKALDTVVQNRTTLVIAHRLSTIRNADLIVVLDQGRVVETGKHDELMGKRGLY 693
            |||||..:|..:||.|:.:.::||.:|:||||||:.|||||:|||:|.::|.|.|.||:.::|.|
 Worm   714 TSALDTPTERAIQKCLEKLCKSRTGVVVAHRLSTVVNADLILVLDKGIILERGNHKELLAQQGTY 778

  Fly   694 FEL----VRQQERRDIQ 706
            ..:    :.:|..:.|:
 Worm   779 ASMWEAQIAEQRAKSIE 795

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1824NP_572810.1 MdlB 119..702 CDD:440747 182/655 (28%)
hmt-1NP_001022812.1 ATM1 213..791 CDD:444078 179/642 (28%)

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