DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1824 and haf-6

DIOPT Version :10

Sequence 1:NP_572810.1 Gene:CG1824 / 32208 FlyBaseID:FBgn0030403 Length:761 Species:Drosophila melanogaster
Sequence 2:NP_490828.3 Gene:haf-6 / 171694 WormBaseID:WBGene00001816 Length:668 Species:Caenorhabditis elegans


Alignment Length:649 Identity:306/649 - (47%)
Similarity:434/649 - (66%) Gaps:25/649 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 PTNASRLLQTTRLLVWGGGSLAIGLGARSWWAGHRGAIVHCEGSRLAIRKEEEEED---TASEQH 116
            |.:.:.:|:|.|:..:|.|..|:.|        .:.|.......|:...:..|:::   ||.|  
 Worm    32 PISRTTILKTWRICGFGAGLGAVTL--------RKAACAPKLSKRIDHLRTTEDQNASMTAGE-- 86

  Fly   117 FDWKRLWTYLEPHLWELIGAVCAALIVAYINIRIPNLLGDLVNTLARYANTYVMDPINN--SFVK 179
                 ||..::|.......||..|::.|||||:||..||||||.:.:    .:.|..||  |..:
 Worm    87 -----LWNLIKPFFGWFFAAVVCAILSAYINIQIPLCLGDLVNGIVK----IIKDESNNLRSHFE 142

  Fly   180 DVSKPASNLLSLYMLQSGFTFMYIYLLSRVGEQMAAKMRQDLFTQIVVQDIAFFDENRTGELVNR 244
            .:...|.:|::||:.||..||:||..|:.:||:||.|||.|||.:::..|:||||.:::|||..|
 Worm   143 QLKPSALHLMTLYVAQSALTFLYITFLTVLGERMATKMRSDLFQKLLHHDMAFFDSHKSGELSAR 207

  Fly   245 LTADVQDFKTSFKQFVSQGLRSAAQLIGGSISLFMISPHMAAIALASVPCVVMFMTYLGKKLRSL 309
            |.||||:||:|||..||||||:.||.||...||:.:||.|....:|.||.:::..:.:|..||.|
 Worm   208 LNADVQEFKSSFKLCVSQGLRTFAQTIGCIGSLYFLSPTMTMYTVAVVPGIILAGSAIGAGLRQL 272

  Fly   310 SKSSQAQAERATGVCEEALSNIRTVRSSACEYREMQLFEAETNEAARLAQKLGYGIAIFQGLTNF 374
            |:.:|.|:..|:.|.:|||:||||:|:.|.|..|.:||:.|.::|..:.::||.||.:||..||.
 Worm   273 SRRAQGQSATASAVSDEALTNIRTIRAFAMEKLESRLFDNELDKARAMQEQLGVGIGLFQAGTNL 337

  Fly   375 FLNTLVLSTLFMGGHLMSTESLSPGALMAFLVASQGVQRSLAQGSILLGTMIRGMSAGSRVFEFL 439
            |||.::||.|:.|.:|:|...::|||||:|||::|.:||||:|.||:.||.|:|.:||.||.:|.
 Worm   338 FLNGMILSVLYGGSNLISKGEMTPGALMSFLVSAQTIQRSLSQLSIIFGTAIKGWTAGGRVLQFS 402

  Fly   440 SLQPQVELLRGYIIPQERLHGEIRFENVSFAYPMQPDHLVLKDFSLTLRPGQTVALVGASGSGKS 504
            .|:|.:.:..|..||...|.|:|:||:|||:||.:|.|.|.::.:|::..||.|||.|.||.|||
 Worm   403 RLEPSIPMDTGVCIPYHSLWGDIKFEDVSFSYPTRPGHTVFENLTLSIPAGQVVALCGPSGEGKS 467

  Fly   505 TIASLVERFYEPSAGNIKLDGYKLSDISPYWLRSNVLGFIEQQPVLFGTSILENIRYGKPDAGEE 569
            ||..|:||||||.:|.:.|||..|.:::..|||..|:|.|.|:||||.||:.||||||:|||.:|
 Worm   468 TITHLLERFYEPKSGRVTLDGRDLRELNVEWLRGQVIGLISQEPVLFATSVEENIRYGRPDATDE 532

  Fly   570 DVYAAARLSQSHDFVTALPDGYATHVGERGTQLSGGQRQRIAIARALLKNPRILILDEATSALDA 634
            :|..|||.:...:||:..|.||:|.|||||.||||||:||||||||:||||.||||||||||||:
 Worm   533 EVREAARAAHVDEFVSRFPSGYSTVVGERGAQLSGGQKQRIAIARAILKNPPILILDEATSALDS 597

  Fly   635 TSEAEVQKALDTVVQNRTTLVIAHRLSTIRNADLIVVLDQGRVVETGKHDELMGKRG-LYFELV 697
            .||..||:||:.|::.||.|:|||||||||:|.:|.|:...:.:|:|.|::||.|:| ||.:||
 Worm   598 HSEHMVQEALNNVMKGRTVLIIAHRLSTIRSAQMIYVIKDKKALESGTHEQLMAKKGSLYRKLV 661

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1824NP_572810.1 MdlB 119..702 CDD:440747 292/582 (50%)
haf-6NP_490828.3 MdlB 87..664 CDD:440747 292/579 (50%)

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