DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1824 and haf-4

DIOPT Version :9

Sequence 1:NP_572810.1 Gene:CG1824 / 32208 FlyBaseID:FBgn0030403 Length:761 Species:Drosophila melanogaster
Sequence 2:NP_001021666.1 Gene:haf-4 / 171639 WormBaseID:WBGene00001814 Length:787 Species:Caenorhabditis elegans


Alignment Length:711 Identity:228/711 - (32%)
Similarity:368/711 - (51%) Gaps:65/711 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 TRLLVWGGGSLAIGLGARSWWAGHRGAIVHCEGSRLAIRKEEEEEDTASEQHFD--------WKR 121
            |..|||...|..|   ..|.|..:   ......|.:.:  |:|:.:.|.:|.|:        .||
 Worm   121 TAFLVWNFISAII---LNSSWTRY---FSRTPSSYIIL--EDEDLEVAPKQTFELIFRLLQYCKR 177

  Fly   122 LWTYLEPHLWELIGAVCAALIVAYINIRIPNLLGDLVNTLARYAN-------TYVMDPINNSFVK 179
            .|      ||.:.| .....|.:...|.:|...|.::.|:....:       .|:|     :.:.
 Worm   178 EW------LWHISG-FSWLFIYSITRIFVPYYTGQVIATVVATKSYPALSNAVYIM-----TIIS 230

  Fly   180 DVSKPASNLLSLYMLQSGFTFMYIYLLSRVGEQMAAKMRQDLFTQIVVQDIAFFDENRTGELVNR 244
            .||..|:..       .|.:|.|.|      .::...:|.|||..:|.||:||:|.::|||:.:|
 Worm   231 LVSAVAAGF-------RGGSFEYAY------ARIQRAIRYDLFHGLVKQDVAFYDAHKTGEVTSR 282

  Fly   245 LTADVQDFKTSFKQFVSQGLRSAAQLIGGSISLFMISPHMAAIALASVPCVVMFMTYLGKKLRSL 309
            |.||.|....:....|:..||:...|:|..|.:..:|..::.:....||.:.:.....|.....|
 Worm   283 LAADCQTMSDTVALNVNVFLRNCVMLLGSMIFMMKLSWRLSLVTFILVPIIFVASKIFGTYYDLL 347

  Fly   310 SKSSQAQAERATGVCEEALSNIRTVRSSACEYREMQLFEAETNEAARLAQKLGYGIAIFQGLTNF 374
            |:.:|.....:..|.||.||.:|||||.:||..|...|..:......:.:........|..::..
 Worm   348 SERTQDTIAESNDVAEEVLSTMRTVRSFSCENVEADRFYGKLTHTLDVTRTKAIAYIGFLWVSEL 412

  Fly   375 FLNTLVLSTLFMGGHLMSTESLSPGALMAFLVASQGVQRSLAQ-GSILLGTMIRGMSAGSRVFEF 438
            |.:.:::|.|:.||||:.|:.:....|::||:....:..:|.| |.:..|.| :.:.|..:|||:
 Worm   413 FQSFIIVSVLWYGGHLVLTQKMKGDLLVSFLLYQMQLGDNLRQMGEVWTGLM-QSVGASRKVFEY 476

  Fly   439 LSLQPQVELLRGYIIPQERLHGEIRFENVSFAYPMQPDHLVLKDFSLTLRPGQTVALVGASGSGK 503
            :..:||:: ..|..:| |.:.|:|.|.||.|:||.:.|..:|||.|.|:.||:||||||.|||||
 Worm   477 IDREPQIQ-HNGEYMP-ENVVGKIEFRNVHFSYPTRSDQPILKDLSFTVEPGETVALVGPSGSGK 539

  Fly   504 STIASLVERFYEPSAGNIKLDGYKLSDISPYWLRSNVLGFIEQQPVLFGTSILENIRYGKPDAGE 568
            |:..||:|.||.|:||.:.:||..|.:...:::...: ..:.|:||||..|::||:||| .:..:
 Worm   540 SSCISLLENFYVPNAGQVLVDGVPLEEFEHHYIHKKI-ALVGQEPVLFARSVMENVRYG-VEVAD 602

  Fly   569 EDVYAAARLSQSHDFVTALPDGYATHVGERGTQLSGGQRQRIAIARALLKNPRILILDEATSALD 633
            .::..:..::.:|.|:......|.|:|||:|||:||||:|||||||||::.|.||:|||||||||
 Worm   603 TEIIRSCEMANAHGFIMQTTLKYETNVGEKGTQMSGGQKQRIAIARALVREPAILLLDEATSALD 667

  Fly   634 ATSEAEVQKALDTVVQNRTTLVIAHRLSTIRNADLIVVLDQGRVVETGKHDELM-GKRGLYFELV 697
            ..||..||:|:...:..::.::|||||||:..||.|||:::|||.:.|.|:.|: ...|.|.:||
 Worm   668 TESEHLVQEAIYKNLDGKSVILIAHRLSTVEKADKIVVINKGRVEQIGNHETLLKDTNGTYAKLV 732

  Fly   698 RQQERRDIQEQVQAVEDVVAVKEQQATATETSTAATIATAAETSAATVTVGSSSFGGRANA 758
            ::|...|.:.:          |......:....||:|..|..:....:::.|:||...|::
 Worm   733 QRQMMGDQKPR----------KRPAVARSGPQPAASINVAGPSQGNAMSLLSTSFSQSASS 783

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1824NP_572810.1 MdlB 119..701 CDD:224055 203/590 (34%)
ABC_membrane 137..415 CDD:279056 71/284 (25%)
ABC_MTABC3_MDL1_MDL2 462..700 CDD:213216 111/238 (47%)
haf-4NP_001021666.1 3a01208 16..732 CDD:273363 215/648 (33%)
ABC_membrane 189..449 CDD:279056 71/277 (26%)
ABC_MTABC3_MDL1_MDL2 498..735 CDD:213216 111/238 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0058
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54509
OrthoDB 1 1.010 - - D684058at2759
OrthoFinder 1 1.000 - - FOG0000243
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100059
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.730

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