DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1824 and abcb1 (provisional)

DIOPT Version :10

Sequence 1:NP_572810.1 Gene:CG1824 / 32208 FlyBaseID:FBgn0030403 Length:761 Species:Drosophila melanogaster
Sequence 2:XP_017950348.2 Gene:abcb1 (provisional) / 100494740 XenbaseID:XB-GENE-950725 Length:1381 Species:Xenopus tropicalis


Alignment Length:725 Identity:234/725 - (32%)
Similarity:347/725 - (47%) Gaps:128/725 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   101 AIRKEEEEEDTASEQHFDWKRLWTYLE----PHLWELI----GAVCAA--------LIVAY---- 145
            |.:..||....:|::  ..|.:..:|:    ...|:::    |..||.        ||:.:    
 Frog    41 APKSNEEARKNSSDK--PSKEMVGFLDMVRFADAWDILLMITGLFCAVANGTGLPLLIIVFGDMT 103

  Fly   146 -----INIRIPNLLG-------DLVNTLARYANTYVMDPINNSFVKDVSKPASNLLSLYMLQSGF 198
                 ..|.:.|:.|       ||...:.||:..|:             ...|.:..|.::|   
 Frog   104 DSFVLSGINVTNVSGCGSIPGIDLEAKMTRYSYYYI-------------GLGSAVFVLSLIQ--- 152

  Fly   199 TFMYIYLLSRVGEQMAAKMRQDLFTQIVVQDIAFFDENRTGELVNRLTADVQ-------DFKTSF 256
              ::.:|:|...:.|  ::||..|..::.||:|:||.|:.|.|..|||.|:.       |....|
 Frog   153 --IWTFLVSATRQIM--RIRQIFFKAVLHQDMAWFDSNQVGTLNTRLTDDINTIHEGLGDKMCIF 213

  Fly   257 KQFVSQGLRS-AAQLIGG---SISLFMISPHMAAIALASVPCVVMFMTYLGKKLRSLSKSSQAQA 317
            .||:|..:.. ....:.|   ::.:..:||.:.|.|......|..|.|   |:|.:.:|      
 Frog   214 VQFLSSFVSGIVVGFVHGWKLTLVILSVSPLLGASAAIWTKLVASFTT---KELHAYAK------ 269

  Fly   318 ERATGVCEEALSNIRTVRSSACEYREMQLFEAETNEAARLAQKLGYGIAIFQGLTNFFLNTLVLS 382
              |..|.||.|:.||||.:...:.:....::|....|..:..|......:..||:.|.:......
 Frog   270 --AGAVAEEILTAIRTVIAFNGQKKAQDKYDANLITAKTVGIKKAVTTNVSMGLSQFLIFGAYAL 332

  Fly   383 TLFMGGHLM--STESLSPG-ALMAFLVASQGVQRSLAQGSILLGTMIRGMSAGSRVFEFLSLQPQ 444
            ..:.|..|.  ..|:.:.| .|:.|.             |:|:||...|.:.           |.
 Frog   333 AFWYGTKLTVDEPETYTIGKVLIVFF-------------SVLVGTFALGQAT-----------PN 373

  Fly   445 VELL---RG-----YII---------------PQERLHGEIRFENVSFAYPMQPDHLVLKDFSLT 486
            :|.|   ||     |.|               ...||.|:|.|:|:.||||.:||..:|...:|.
 Frog   374 IESLANARGAAFAVYNIINKHRPIDSSSEEGHKPNRLKGDIEFKNIHFAYPCRPDVQILSGLNLK 438

  Fly   487 LRPGQTVALVGASGSGKSTIASLVERFYEPSAGNIKLDGYKLSDISPYWLRSNVLGFIEQQPVLF 551
            :..|:|:||||.||.||||...|::|||:||.|.|.|||:.:..::..|||.|: |.:.|:||||
 Frog   439 VEAGKTIALVGMSGCGKSTTIQLLQRFYDPSHGEITLDGHDIRTLNVKWLRENI-GVVSQEPVLF 502

  Fly   552 GTSILENIRYGKPDAGEEDVYAAARLSQSHDFVTALPDGYATHVGERGTQLSGGQRQRIAIARAL 616
            ||:|.||||:|:....:.::..||:.:.:.||::.|||.:.|.|||||.||||||:|||||||||
 Frog   503 GTTIAENIRFGRESVTDSEIEQAAKEANAFDFISRLPDKFKTMVGERGAQLSGGQKQRIAIARAL 567

  Fly   617 LKNPRILILDEATSALDATSEAEVQKALDTVVQNRTTLVIAHRLSTIRNADLIVVLDQGRVVETG 681
            ::||:||:|||||||||..|||.||.|||.....|||:||||||||||.||:|.....|.|||.|
 Frog   568 VRNPKILLLDEATSALDTQSEAIVQAALDKARAGRTTIVIAHRLSTIRTADVIAGFHNGVVVEKG 632

  Fly   682 KHDELMGKRGLYFELVR-QQERRDIQEQVQAVEDVVAVKEQQATATETSTAATIATAAETSAATV 745
            .|.|||.|:|:|:.||. |::..|...:....|:...::.::....|...:.....|.:....|.
 Frog   633 SHSELMTKKGVYYSLVMLQKQGEDSGPEDNEQEEHSFLETEETYLNEDCLSPEADPAHQAVECTD 697

  Fly   746 TVGSSSFGGR 755
            .....||.||
 Frog   698 FFRRESFRGR 707

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1824NP_572810.1 MdlB 119..702 CDD:440747 221/652 (34%)
abcb1 (provisional)XP_017950348.2 PTZ00265 77..1371 CDD:240339 227/687 (33%)

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