DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1824 and tap1

DIOPT Version :9

Sequence 1:NP_572810.1 Gene:CG1824 / 32208 FlyBaseID:FBgn0030403 Length:761 Species:Drosophila melanogaster
Sequence 2:XP_031747270.1 Gene:tap1 / 100494735 XenbaseID:XB-GENE-486762 Length:716 Species:Xenopus tropicalis


Alignment Length:606 Identity:188/606 - (31%)
Similarity:322/606 - (53%) Gaps:37/606 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   104 KEEEEEDTASEQHFDWKRLWTYLEPHLWELIGAVCAALIVAYINIRIPNLLGDLVNTLARYANTY 168
            |::.|...||     ..||...|:|:::..:......::.::..:.:|:..|.:.:.:|.     
 Frog   132 KKDAEVTAAS-----LGRLIALLKPYIFRFLLVAFFLVLSSWGELALPSYTGHMTDWIAN----- 186

  Fly   169 VMDPINNSFVKDVSKPASNLLSLYMLQSGFTFMYIYLLSRVGEQMAAKMRQDLFTQIVV-QDIAF 232
            ..||  :||...:.  |.:|:::....:.|....||.::.   .:.....|.|..:.|: |:|.|
 Frog   187 KKDP--SSFTTAII--AMSLITVASAVAEFVCDCIYFMTM---SLIHSHTQGLLIRSVLRQEITF 244

  Fly   233 FDENRTGELVNRLTADVQDFKTSFKQFVSQGLRSAAQLIGGSISLFMISPHMAAIALASVPCVVM 297
            ||...||::.:|:|.|......|....:|..:....:|:.....:.|:|..:....:..:..|::
 Frog   245 FDSTSTGDITSRVTTDTITMAESLSSNLSLLMWYFMRLVLLLTYMVMLSTKLTFFTILCLGIVIL 309

  Fly   298 FMTYLGKKLRSLSKSSQAQAERATGVCEEALSNIRTVRSSACEYREMQLFEAETNEAARL--AQK 360
            .....|...::|:...|.....|..|..|..||::||:|.|.|..|.|.:|::..|..:|  .:.
 Frog   310 VPKLSGTFYQNLAVQVQQSLSNANQVALETFSNMKTVKSFANEEGECQRYESKLQETYQLNKMEA 374

  Fly   361 LGYGIAI----FQGLTNFFLNTLVLSTLFMGGHLMSTESLSPGALMAFLVASQGVQRSLAQGSIL 421
            |.|.|::    |.||      .|.:..|:.||.|::...:|.|.|::|::..  :|.|.|...:|
 Frog   375 LYYAISMVANNFSGL------ALKVGILYYGGRLVTNGKVSGGDLVSFVLYE--LQFSSAVEVLL 431

  Fly   422 --LGTMIRGMSAGSRVFEFLSLQPQVELLRGYIIPQERLHGEIRFENVSFAYPMQPDHLVLKDFS 484
              ...:.:.:.:..::||::...|::. ..|.:.|.: |.|.|:|:||:|::|.:||...|:|.|
 Frog   432 RMYPDVRKAVGSSEKIFEYMDRIPKLP-SAGTLAPPD-LKGVIQFKNVTFSFPTRPDMTALQDVS 494

  Fly   485 LTLRPGQTVALVGASGSGKSTIASLVERFYEPSAGNIKLDGYKLSDISPYWLRSNVLGFIEQQPV 549
            ..|.||:..||||...:||||:..|:.|||||..|.|.|||..||.....:.|..| ..:.|:|.
 Frog   495 FELPPGKVTALVGPCDAGKSTVVQLLMRFYEPQKGAILLDGKPLSQYDNQYYRKKV-SLVSQEPT 558

  Fly   550 LFGTSILENIRYGKPDAGEEDVYAAARLSQSHDFVTALPDGYATHVGERGTQLSGGQRQRIAIAR 614
            |...|:.:||.||..:.....|..||:.:.:|||::.:.:.|.|.||.:|..||.||:||:|:||
 Frog   559 LSACSLQDNIAYGMGNVSFRSVQEAAKTADAHDFISEMANSYQTGVGPKGGLLSVGQKQRVALAR 623

  Fly   615 ALLKNPRILILDEATSALDATSEAEVQKALDTVVQNRTTLVIAHRLSTIRNADLIVVLDQGRVVE 679
            |||:.|::||||:|||:||..||.:||.|:...:..||.|:|:||::|::.||.|:||:.|.:.|
 Frog   624 ALLRKPKVLILDDATSSLDVESELKVQNAIYDQLAERTVLLISHRMNTVQRADHILVLEGGCITE 688

  Fly   680 TGKHDELMGKRGLYFELVRQQ 700
            .|.|::||.::|.|::|.::|
 Frog   689 EGTHEQLMAQKGSYWKLWQKQ 709

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1824NP_572810.1 MdlB 119..701 CDD:224055 184/591 (31%)
ABC_membrane 137..415 CDD:279056 65/284 (23%)
ABC_MTABC3_MDL1_MDL2 462..700 CDD:213216 104/237 (44%)
tap1XP_031747270.1 3a01208 10..705 CDD:273363 186/600 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D684058at2759
OrthoFinder 1 1.000 - - FOG0000243
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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