DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1824 and abcb8

DIOPT Version :9

Sequence 1:NP_572810.1 Gene:CG1824 / 32208 FlyBaseID:FBgn0030403 Length:761 Species:Drosophila melanogaster
Sequence 2:NP_001121515.1 Gene:abcb8 / 100158634 XenbaseID:XB-GENE-1010256 Length:688 Species:Xenopus tropicalis


Alignment Length:707 Identity:339/707 - (47%)
Similarity:457/707 - (64%) Gaps:39/707 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 HLLQPTQQPLPRLQNAARLMRQHLRGTNAPQPPAIPPT--NASRLLQTTR-------LLVWGGGS 74
            |.|   |..|.:.:..|||:... .|.:..:.|::|.|  |.|||....|       ..|..|..
 Frog     4 HFL---QAGLRQCRPPARLVGLE-TGLSGARGPSLPATLANYSRLRNACRPPWRSPWKPVKKGKL 64

  Fly    75 LAIGLGARSWWAGHRGAIVHCEGSRLA--------IRKEEEEEDTASEQHFDWKRLWTYLEPHLW 131
            ||:.||......|.|.|  .|:...:|        .|.|.|         |:|...|..|.|.|.
 Frog    65 LAVLLGPAVLGVGVRAA--RCQVELIAPPLIVPQGARPEPE---------FNWAEFWKLLRPQLI 118

  Fly   132 ELIGAVCAALIVAYINIRIPNLLGDLVNTLARYANTYVMDPINNSFVKDVSKPASNLLSLYMLQS 196
            .|:.||..|...|.:|||||.:||:|||.::||...:.     .:::::|..||..||.||..|.
 Frog   119 ALLTAVLLAFGAALLNIRIPLMLGELVNVVSRYTREHA-----GNYLQEVQGPALKLLCLYGAQG 178

  Fly   197 GFTFMYIYLLSRVGEQMAAKMRQDLFTQIVVQDIAFFDENRTGELVNRLTADVQDFKTSFKQFVS 261
            ..|..||.|||||||::|..||:.||..::.||:||||..:||.||||||:|||:||:||||.:|
 Frog   179 LLTCGYIVLLSRVGERVAGSMRKSLFFSLLRQDVAFFDAEKTGLLVNRLTSDVQEFKSSFKQVIS 243

  Fly   262 QGLRSAAQLIGGSISLFMISPHMAAIALASVPCVVMFMTYLGKKLRSLSKSSQAQAERATGVCEE 326
            |||||..|.:|..:||:.|||.:..:.|..:|.:|.....:|..||.||:.:|.|..||||:.:|
 Frog   244 QGLRSLTQTVGCFLSLYYISPKLTGLLLVVMPVLVGSGALIGSFLRKLSRRAQEQVARATGLADE 308

  Fly   327 ALSNIRTVRSSACEYREMQLFEAETNEAARLAQKLGYGIAIFQGLTNFFLNTLVLSTLFMGGHLM 391
            ||.|:|||::.|.|.|||:|:.||.::::...:.||.|||:||||:|..||.:||.|:|.||.||
 Frog   309 ALGNVRTVKAFAMESREMELYSAEVDKSSGQNEVLGVGIAVFQGLSNVVLNCIVLGTIFAGGSLM 373

  Fly   392 STESLSPGALMAFLVASQGVQRSLAQGSILLGTMIRGMSAGSRVFEFLSLQPQVELLRGYIIPQE 456
            |::.||.|.||:||||||.||||:|..|:|.|.::||:|||.|||||:||:|.:.|..|:.:|. 
 Frog   374 SSKELSAGELMSFLVASQTVQRSMANMSVLFGQVVRGLSAGGRVFEFMSLEPTIPLSGGFKLPV- 437

  Fly   457 RLHGEIRFENVSFAYPMQPDHLVLKDFSLTLRPGQTVALVGASGSGKSTIASLVERFYEPSAGNI 521
             |.|||.|::|||:||.:|.|.||:.|.|.:..|:||||||.||.||||:|:|:||||:|:.|.:
 Frog   438 -LRGEIHFKDVSFSYPTRPGHEVLRSFDLRIPHGKTVALVGQSGGGKSTVAALLERFYDPTEGAV 501

  Fly   522 KLDGYKLSDISPYWLRSNVLGFIEQQPVLFGTSILENIRYGKPDAGEEDVYAAARLSQSHDFVTA 586
            :|||..:..:.|.|||..|:|||.|:||||||:|:||||:|:|||.:.:|:.||..:.:..|:.:
 Frog   502 QLDGVDIRILDPSWLRGEVIGFINQEPVLFGTTIIENIRFGRPDATDAEVHEAAIQANADSFIRS 566

  Fly   587 LPDGYATHVGERGTQLSGGQRQRIAIARALLKNPRILILDEATSALDATSEAEVQKALDTVVQNR 651
            .|:||.|.:||||..|||||:||:||||||||:|:||||||||||||..||..||.|||.....|
 Frog   567 FPEGYNTMLGERGVTLSGGQKQRVAIARALLKDPKILILDEATSALDTESERAVQVALDRARSGR 631

  Fly   652 TTLVIAHRLSTIRNADLIVVLDQGRVVETGKHDELMGKRGLYFELVRQQERRDIQEQ 708
            |.||||||||||..||.||||.:|:|.|.|.|.:|:.:.|||.:|:|:|.:...:.|
 Frog   632 TVLVIAHRLSTISEADFIVVLSKGQVAEFGTHQDLLRRGGLYADLIRRQNQESQEAQ 688

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1824NP_572810.1 MdlB 119..701 CDD:224055 306/581 (53%)
ABC_membrane 137..415 CDD:279056 138/277 (50%)
ABC_MTABC3_MDL1_MDL2 462..700 CDD:213216 137/237 (58%)
abcb8NP_001121515.1 ABC_6TM_ABCB8_like 123..417 CDD:350018 149/298 (50%)
MsbA_rel 187..680 CDD:131259 273/494 (55%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 255 1.000 Domainoid score I2017
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H5203
Inparanoid 1 1.050 596 1.000 Inparanoid score I954
OMA 1 1.010 - - QHG54509
OrthoDB 1 1.010 - - D221577at33208
OrthoFinder 1 1.000 - - FOG0000243
OrthoInspector 1 1.000 - - oto104398
Panther 1 1.100 - - LDO PTHR24221
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4240
SonicParanoid 1 1.000 - - X5381
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1313.110

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