DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1824 and abcc1

DIOPT Version :9

Sequence 1:NP_572810.1 Gene:CG1824 / 32208 FlyBaseID:FBgn0030403 Length:761 Species:Drosophila melanogaster
Sequence 2:XP_001341895.3 Gene:abcc1 / 100002010 ZFINID:ZDB-GENE-050517-15 Length:1518 Species:Danio rerio


Alignment Length:710 Identity:182/710 - (25%)
Similarity:311/710 - (43%) Gaps:117/710 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 LPR--LQNA--ARLMRQHLRGTNAPQPPAIPPTNASRLLQTTRLLVWGGGSLAIGLGARSWWAGH 88
            :||  |:|.  |.|:||.....||        |.|.:..|.|.     ....|.....:|     
Zfish   882 VPRKGLENGGPAALLRQSQISLNA--------TGAGKTTQKTE-----ANDDAAATKTKS----- 928

  Fly    89 RGAIVHCEGSRLAIRKEEEEEDTASEQHFDWKRLWTYLEPHLWELIGAVCAALIVAYINIRIPNL 153
                  .|.|||.      |.|.|:.........|.|::        |:...|.:..|.:...:.
Zfish   929 ------AEASRLT------EADKANTGRVKLSVFWEYMK--------AIGLPLSIFSIFLFFCHH 973

  Fly   154 LGDLVNTLARYANTYVMDPINNSFVKDVSKPASNL-LSLY----MLQSGFTFMYIYLLSRVGEQM 213
            |..|.:..  :.:.:..||:.|:     ::|...: |.:|    :.|....|.|...:| ||..:
Zfish   974 LSSLGSNY--WLSLWTDDPVVNN-----TQPKREMRLGVYGALGISQGIAVFCYSVSVS-VGGIL 1030

  Fly   214 AAK-MRQDLFTQIVVQDIAFFDENRTGELVNRLTADVQDFKTSFKQFVSQGLRSAAQLIGGSISL 277
            |:: :.|.:...::...::||:...:|.||||...:.....:.....:...:.|...:: ||.::
Zfish  1031 ASRYLHQTMLYNVLRSPMSFFERTPSGNLVNRFAKETDTIDSVIPSIIKMFMGSMFNVL-GSCAV 1094

  Fly   278 FMISPHMAAIALASVPCVVMFMT--YLG-----KKLRSLSKSSQAQAERATGVCEEALSNIRTVR 335
            .:|:..:.||.:..:..:..|:.  |:.     |:|.|:|:|.      ......|.|.....:|
Zfish  1095 ILIATPLVAIIIPPLGLLYFFVQRFYVASSRQMKRLESVSRSP------VYTHFNETLLGTSVIR 1153

  Fly   336 SSACEYREMQLFEAETNEAARLAQKLGYGIAIFQGLT---------NFFLNTLV-LSTLFMGGHL 390
            :    :.|.|.|..|::......||     |.|..:.         .|..|.:| .:.||.   :
Zfish  1154 A----FGEQQRFIKESDGRVDHNQK-----AYFPSIVANRWLAVRLEFVGNCIVTFAALFA---V 1206

  Fly   391 MSTESLSPGALMAFLVASQGVQRSLA-QGSILLGTMIRGMS-------AGSRVFEFLSLQPQVE- 446
            |:..:||||.:        |:..|.| |.:..|..::|..|       |..||.|:...:.:.| 
Zfish  1207 MARNNLSPGIM--------GLSISYALQVTASLNWLVRMSSELETNIVAVERVKEYGDTEKEAEW 1263

  Fly   447 -LLRGYIIPQERLHGEIRFENVSFAYPMQPDHLVLKDFSLTLRPGQTVALVGASGSGKSTIASLV 510
             |....:.|.....|.|........| .:...|.:.|.|:.:..|:.|.:||.:|:|||::...:
Zfish  1264 KLENSNLPPGWPTAGHIEIHKFGLRY-REDLELAICDISVNIAGGEKVGIVGRTGAGKSSLTLGL 1327

  Fly   511 ERFYEPSAGNIKLDGYKLSDISPYWLRSNVLGFIEQQPVLFGTSILENIRYGKPDAG--EEDVYA 573
            .|..|.:.|.|::||..::|:..:.|||.:. .|.|.||||..|:..|:   .|..|  :|:|:.
Zfish  1328 FRIIEAAEGEIRIDGVNIADLGLHELRSRIT-IIPQDPVLFSGSLRMNL---DPFDGYTDEEVWR 1388

  Fly   574 AARLSQSHDFVTALPDGYATHVGERGTQLSGGQRQRIAIARALLKNPRILILDEATSALDATSEA 638
            :..|:....||:.|||.......|.|..||.||||.:.:|||||:..:||:|||||:|:|..::.
Zfish  1389 SLELAHLKTFVSGLPDKLNHECSEGGENLSLGQRQLVCLARALLRKTKILVLDEATAAVDLETDN 1453

  Fly   639 EVQKALDTVVQNRTTLVIAHRLSTIRNADLIVVLDQGRVVETGKHDELMGKRGLYFELVR 698
            .:|..:.|..::.|.|.|||||:||.:...::|||:|::.|......|:.|:|:::::.:
Zfish  1454 LIQSTIRTQFEDCTVLTIAHRLNTIMDYTRVLVLDKGQMAEFDSPSNLIAKKGIFYKMAK 1513

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1824NP_572810.1 MdlB 119..701 CDD:224055 159/615 (26%)
ABC_membrane 137..415 CDD:279056 60/300 (20%)
ABC_MTABC3_MDL1_MDL2 462..700 CDD:213216 82/239 (34%)
abcc1XP_001341895.3 MRP_assoc_pro 7..1517 CDD:188098 182/710 (26%)
ABC_membrane 331..595 CDD:279056
ABCC_MRP_domain1 641..842 CDD:213217
ABC_membrane 966..1231 CDD:279056 62/299 (21%)
ABCC_MRP_domain2 1278..1498 CDD:213211 80/224 (36%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.000

Return to query results.
Submit another query.