DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment LIMK1 and WAKL1

DIOPT Version :9

Sequence 1:NP_511139.2 Gene:LIMK1 / 32207 FlyBaseID:FBgn0283712 Length:1257 Species:Drosophila melanogaster
Sequence 2:NP_173063.1 Gene:WAKL1 / 838181 AraportID:AT1G16120 Length:730 Species:Arabidopsis thaliana


Alignment Length:862 Identity:165/862 - (19%)
Similarity:276/862 - (32%) Gaps:318/862 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 PVSGGHSPLCAHCRGQLLPHPEEPIVMALGQQWHCDCFRCSVCEGHLHNWY-------------- 74
            |:|...:.....|.|..:|.|     ..:|.:   ||:        |:.||              
plant    31 PISNSSTSCNKTCGGISIPFP-----FGIGGK---DCY--------LNGWYEVICNTTTSDSNTT 79

  Fly    75 ------FEREGLLYCREDYYGRFGDACQQCMAVITGPVMVAGEHKFHPECFCCTACG-------- 125
                  ..||.:.....|....:|      :..|.|||...|       |...|:.|        
plant    80 VPLLSMINREVVNISLPDSNEPYG------LVQIKGPVTSLG-------CSSNTSEGPQNSLPVL 131

  Fly   126 SFIGEGESYALVERSKLYCGQCYGKRSCQPADAKARITTAGKPMHSIRLVEIPKDATPGLRVDGV 190
            :..|:|..|.|.:.::|....| |.::.. .|.::.|.                           
plant   132 NVTGKGSPYFLTDENRLVAVGC-GIKALM-TDTESEIL--------------------------- 167

  Fly   191 ALDDGCPT--------VRITDLFCNFFLWLTSMAEQCC------GAPYRIDVNLTNLHIGDRILE 241
                ||.:        ..:|:|.|..:        :||      |.|..|.||:.|...|:...:
plant   168 ----GCESSCEHRKSGEEVTNLICTGY--------RCCQARLPVGRPQAITVNIENSSGGEETCK 220

  Fly   242 V---NGTPVSDSSVEQIDKLIRSNEKMLQL--------------------------------TVE 271
            |   .....|.|:|.:.::...:...:|:|                                :.|
plant   221 VAFLTDKRYSPSNVTEPEQFHNNGYVVLELGWYFATSNSRFKSLLGCTNMSRKGSGFSDDNCSCE 285

  Fly   272 HD-------------------------------------------------PVQVCRSCSQADIQ 287
            :|                                                 |:.:||  ....|.
plant   286 YDYFSGMSYRNCYCDYGYTGNPYLRGGCVDTDSCEGNHNCGEDAHCVNMPGPMSMCR--PNPKIT 348

  Fly   288 RAMSASTL--ILPLSTSASSVEVGRERLYKTPGEQGTKARKLRQATNASTTIPPAAGATAMTQLK 350
            :......|  || :..|.....||...|:|.       .:|.|....:........|.....||.
plant   349 KPTKPPVLQGIL-IGLSGLVFFVGLFWLFKL-------IKKRRNINRSKKFFKRNGGLLLKQQLT 405

  Fly   351 EKERCSSLSKLLDEQHQAQQHSAHPQLYDLSRTQSCRVVQKPQRIFRATD-LVIGEKLGEGFFGK 414
            .|:....:||:...                            :.:.:||| ..|...||:|..|.
plant   406 TKDGNVEMSKIFSS----------------------------KELRKATDNFSIDRVLGQGGQGT 442

  Fly   415 VFKVTHRQSGEVMVLKELHRADEEAQRNFIKEVAVLRLLDHRHVLKFIGVLYKDKKLHMVTEYVA 479
            |:| .....|.::.:|.....||:....||.|:.:|..::||:::|.:|...:.:...:|.||:.
plant   443 VYK-GMLVDGSIVAVKRSKVVDEDKMEEFINEIVLLSQINHRNIVKLLGCCLETEVPILVYEYIP 506

  Fly   480 GGCLKELIHDPAQ--VLPWPQRVRLARDIACGMSYLH---SMNIIHRDLNSMNCLVREDRSVIVA 539
            .|.|.:.:||.:.  .:.|..|:|:|.:||..::|:|   |..|.|||:.:.|.|:.|.....|:
plant   507 NGDLFKRLHDESDDYTMTWEVRLRIAIEIAGALTYMHSAASFPIFHRDIKTTNILLDEKYRAKVS 571

  Fly   540 DFGLARSVDAPRLPSGNMTPGGYGSGANSDAPMSPSGTLRRSKSRQRRQRYTVVGNPYWMAPEMM 604
            |||.:|||...:.....:..|.:|                                  :|.||..
plant   572 DFGTSRSVTLDQTHLTTLVAGTFG----------------------------------YMDPEYF 602

  Fly   605 KGLKYDEKVDVFSFGIMLCEII------GRVEADP---------DFMPRNS-----DFSLNQQEF 649
            ...:|..|.||:|||::|.|:|      .||.::.         :.|..|.     |..:..:..
plant   603 LSSQYTHKSDVYSFGVVLVELITGEKPLSRVRSEEGRGLATHFLEAMKENRVIDIIDIRIKDESK 667

  Fly   650 REKFCAQCPEPFVKVAFVCCDLNPDMRPCFETLHVWLQRLADDLAADRVPPERLLHEIETFQEWY 714
            .|:..|     ..|:|..|.:.....||.       ::.::::|...|..||.|  ::.|..|  
plant   668 LEQVMA-----VAKLARKCLNRKGKNRPN-------MKEVSNELERIRSSPEDL--DVRTENE-- 716

  Fly   715 ASSEDALSPTSQRSLNN 731
              .|:...|   .::||
plant   717 --DEEEDQP---MAINN 728

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LIMK1NP_511139.2 LIM1_LIMK 33..88 CDD:188750 13/74 (18%)
LIM2_LIMK 95..148 CDD:188751 13/60 (22%)
PDZ_signaling 172..271 CDD:238492 20/147 (14%)
STKc_LIMK 407..693 CDD:271056 75/310 (24%)
WAKL1NP_173063.1 GUB_WAK_bind 36..153 CDD:372835 27/145 (19%)
WAK 184..286 CDD:254827 17/109 (16%)
PKc_like 435..702 CDD:389743 76/313 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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