DRSC/TRiP Functional Genomics Resources

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Protein Alignment LIMK1 and tesk2

DIOPT Version :10

Sequence 1:NP_511139.2 Gene:LIMK1 / 32207 FlyBaseID:FBgn0283712 Length:1257 Species:Drosophila melanogaster
Sequence 2:NP_001103946.1 Gene:tesk2 / 568213 ZFINID:ZDB-GENE-070209-68 Length:634 Species:Danio rerio


Alignment Length:760 Identity:202/760 - (26%)
Similarity:309/760 - (40%) Gaps:241/760 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   400 DLVIGEKLGEGFFGKVFKVTHRQSGEVMVLKELHRADEEAQRNFIKEVAVLRLLDHRHVLKFIGV 464
            |..|.|.:|.|||.:|:||.||.|.:||.||....:...|  |.::||.::..|.|.::|:|:||
Zfish    57 DDFICEWIGSGFFSEVYKVRHRASDQVMALKMNKLSSNRA--NMLREVQLMNRLSHPNILRFMGV 119

  Fly   465 LYKDKKLHMVTEYVAGGCLKELIHDPAQVLPWPQRVRLARDIACGMSYLHSMNIIHRDLNSMNCL 529
            ..::.:||.:|||:.||.|::|: |..:.|.|..||:||.:||.|:|||||..|.||||.|.|||
Zfish   120 CVQEGQLHALTEYINGGNLEQLL-DSNKFLSWATRVKLALEIAMGLSYLHSKGIFHRDLTSKNCL 183

  Fly   530 VREDR---SVIVADFGLARSVDAPRLPSGNMTPGGYGSGANSDAPMSPSGTLRRSKSRQRRQRYT 591
            ::.|.   :.||.|||||.     ::||.:                            ...::.:
Zfish   184 IKSDENGYTAIVGDFGLAE-----KIPSHD----------------------------YEGEKLS 215

  Fly   592 VVGNPYWMAPEMMKGLKYDEKVDVFSFGIMLCEIIGRVEADPDFMPRNSDFSLNQQEFREKFCAQ 656
            |||:|:|||||:::...|:||.||||:||:|||||.|::||||::||..:|.|:...| :.....
Zfish   216 VVGSPFWMAPEVLRDEPYNEKADVFSYGIILCEIIARIQADPDYLPRTENFGLDYHAF-QHMVGD 279

  Fly   657 CPEPFVKVAFVCCDLNPDMRPCFETLHVWLQRLADDLAADRVPPERLLHEIETFQEWYASSEDAL 721
            ||..|:::||.||:::|.:||.|..:...|:.:...|.|:....||:|                 
Zfish   280 CPADFLQLAFNCCNMDPKLRPSFPDIVKRLEEIQKKLKAEESERERML----------------- 327

  Fly   722 SPTSQRSLNNLDELVKSAVDSEISPVEK---EKENMVIKP---QD---IPKSPHLGKDFSPSGER 777
                           .:|.:.|..|:.|   ||....:.|   ||   .||||...::...|  |
Zfish   328 ---------------LTAGEVEKKPIPKGPGEKGIKRLNPLGFQDDKIPPKSPRPRRNIWLS--R 375

  Fly   778 LRDSMRARRRQRFLGAQEERRNLTPDTESKERALKKALKKCRPFGERGYLVDLRAGAELQLEDVR 842
            .:..:.||:..|.:..|:...|..|      |.....|.|..||..|   .||: |.:::..|:.
Zfish   376 SQSDIFARKPARKVNVQDPYYNPEP------RGFIHGLPKVNPFSAR---EDLK-GGKIKFYDMP 430

  Fly   843 ---------DLNTYSDVDSSCDTSLNYHDVNNLPAAQEDENTVKPGKEELLEESTNKPSNQESQH 898
                     ||::.....||.....|....||.|     |....||:                  
Zfish   431 SKSVFSLMFDLHSPHGSQSSQQPQPNISGANNWP-----EPWQLPGR------------------ 472

  Fly   899 HRLAIDDMRTRLNQCRS-----KFEHLE-----------EASRRNFNQSQHSMKNFFKTPPVALK 947
                         ||||     :..|.|           ||::.|....|.::.::.|...|   
Zfish   473 -------------QCRSLPVSPQLPHSEVLFSSHPASRSEAAQPNGESRQRTLNSWAKKFTV--- 521

  Fly   948 MFQRLEHEAAALNGGNNCPPPPPRTQRINQTPIFGRKNPPVAIVGQKLQHAESLEDLASSGVAKQ 1012
                           ...||..||..|                    .:..|:.||.:|      
Zfish   522 ---------------TEIPPYKPRADR--------------------EEEVEATEDWSS------ 545

  Fly  1013 LATPAPKRSKATATTKGGQSSNPPLFLPPSLNISVALNSNGNVT----TTTNT--NSSCPPSASD 1071
                       ...:.||::.        :::.|   :|.|:..    ||.|.  |..|....::
Zfish   546 -----------LIPSDGGETE--------AMDCS---SSRGSPADDKDTTLNQMHNGFCEDMEAE 588

  Fly  1072 -----WLPKKHKLTLPLPSAQQQ----------RTSSNHRLPMCN 1101
                 .:..|:.|||.:....|:          .:||..|:..|:
Zfish   589 DQDGVLVTNKNSLTLSMSVEPQELCPIVLTACKASSSGERISRCD 633

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LIMK1NP_511139.2 LIM1_LIMK 33..88 CDD:188750
LIM2_LIMK 95..148 CDD:188751
PDZ_LIMK-like 169..274 CDD:467236
STKc_LIMK 407..693 CDD:271056 112/288 (39%)
tesk2NP_001103946.1 PKc_TESK 64..316 CDD:271057 112/288 (39%)
Blue background indicates that the domain is not in the aligned region.

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