DRSC/TRiP Functional Genomics Resources

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Protein Alignment LIMK1 and tesk1a

DIOPT Version :10

Sequence 1:NP_511139.2 Gene:LIMK1 / 32207 FlyBaseID:FBgn0283712 Length:1257 Species:Drosophila melanogaster
Sequence 2:XP_021332499.1 Gene:tesk1a / 556048 ZFINID:ZDB-GENE-090312-74 Length:657 Species:Danio rerio


Alignment Length:780 Identity:216/780 - (27%)
Similarity:310/780 - (39%) Gaps:192/780 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   370 QHSAHPQLYDL-----SRTQSCRVVQKPQRIFRATDLVIGEKLGEGFFGKVFKVTHRQSGEVMVL 429
            |....|.|:.|     .|..|.|.::.........|....||:|.|||.:||||.||.:|:||.|
Zfish     7 QEPCEPPLHALYGPNRIRPSSYRALRSAVSSLARIDDFFCEKIGSGFFSEVFKVQHRITGQVMAL 71

  Fly   430 KELHRADEEAQRNFIKEVAVLRLLDHRHVLKFIGVLYKDKKLHMVTEYVAGGCLKELIHDPAQVL 494
            |....|..:|  |.::||.::..|.|.::|:|:||...:.:||.:|||:.||.|::|: |....|
Zfish    72 KMNTLASNKA--NMLREVQLMNRLCHPNILRFLGVCVHEGQLHALTEYINGGNLEQLL-DSDIYL 133

  Fly   495 PWPQRVRLARDIACGMSYLHSMNIIHRDLNSMNCLVREDR---SVIVADFGLARSVDAPRLPSGN 556
            .|..|:.|:.|||.|:.||||..|.||||.|.|||||.:.   :.:|.|||||.     ::|.  
Zfish   134 SWTVRIGLSLDIARGLQYLHSKGIFHRDLTSKNCLVRCENGAFTAVVGDFGLAE-----KIPD-- 191

  Fly   557 MTPGGYGSGANSDAPMSPSGTLRRSKSRQRRQRYTVVGNPYWMAPEMMKGLKYDEKVDVFSFGIM 621
                 |..|.                   .:|...|||:||||||||::|..|:||||||::||:
Zfish   192 -----YSDGV-------------------EKQPLAVVGSPYWMAPEMLRGELYNEKVDVFAYGII 232

  Fly   622 LCEIIGRVEADPDFMPRNSDFSLNQQEFREKFCAQCPEPFVKVAFVCCDLNPDMRPCFETLHVWL 686
            |||||.|:|||||.:||..||.|:...| |.....||..|:::|..||::|.|.||.|..:.|.|
Zfish   233 LCEIIARIEADPDILPRTEDFGLDVDTF-EHMVGDCPPSFLQMAVDCCNMNADSRPAFSEIVVML 296

  Fly   687 QRLADDLAADRVPPERLLHEIETFQEWYASSEDALSPTSQRSLNNLDELVKSAVDSEISPVEKEK 751
            :|:..:.....:|.  :|..|......|........|..||...:..:::..|.           
Zfish   297 ERIERERVKSEIPV--ILEPIAIDVSPYRRRSSPCHPCDQRLSRSQSDMLPPAT----------- 348

  Fly   752 ENMVIKPQDIPKSPHLGKDFSPSGERLRDSMRARRRQRFLGAQEERRNLT------PDTE----- 805
                        ||.||.....:...||..:...|.:.|....:...:||      ||..     
Zfish   349 ------------SPCLGTPARVNPFSLRQDLNGGRIKLFDTPSKSVISLTFTLPPPPDPSASPPL 401

  Fly   806 SKERALKKALKKCR------------PFGERGYLVDLRAGAELQLEDVRDLNTYSDV--DSSCDT 856
            |....|:...::||            ||.::....|.......:.:| ::|....|.  ||....
Zfish   402 SGSPGLRGPPRRCRSLPCTPELGRQLPFRDQEVEEDRSEELGQETKD-KELEGQQDAVEDSGLVL 465

  Fly   857 SLNYHDVNNLPAAQEDENTVKPGKEELLEESTNKPSNQESQHHRLAIDDMRTRLNQCRSKFEHLE 921
            .|:...:..:...:|||...|.|      :|..:|.:                   |.|..:..|
Zfish   466 DLDMVSLERVEEEEEDEEVEKEG------QSLTEPMD-------------------CSSSPDTTE 505

  Fly   922 --EASRRNFNQSQHS---MKNFFKTP----PVALKMFQRLEHEAAALNGG------------NNC 965
              .:.:|..:.|.:|   ..|.:.||    |..|....||::....|..|            ...
Zfish   506 GNVSGKRLISGSSYSSSLQSNGWATPISNGPPLLPPLPRLDNNNGVLRPGRPFAWVRLNGYRGPA 570

  Fly   966 PPPPPRTQRINQTPIFGRKNPPVAIVGQKLQHAESLEDLASSGVAKQLATPAPKR--------SK 1022
            |.|.|.|::.:....     |...:.|      .|...|...|.......| |:|        ..
Zfish   571 PEPLPPTEQDDVISC-----PACCLAG------FSFPSLCLRGAPPSRRGP-PRRPYRTFNGGDA 623

  Fly  1023 ATATTKGGQSSNPPLFLPPSLNISVALNSNGNVTTTTNTNSSCPPSASDWLPKKHKLTLPLPSAQ 1087
            :|||.||                   |...| .|....:.:||.|.            ||||.||
Zfish   624 STATAKG-------------------LLCRG-ATGLAPSTASCEPG------------LPLPEAQ 656

  Fly  1088  1087
            Zfish   657  656

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LIMK1NP_511139.2 LIM1_LIMK 33..88 CDD:188750
LIM2_LIMK 95..148 CDD:188751
PDZ_LIMK-like 169..274 CDD:467236
STKc_LIMK 407..693 CDD:271056 122/288 (42%)
tesk1aXP_021332499.1 PKc_TESK 49..303 CDD:271057 122/288 (42%)
Blue background indicates that the domain is not in the aligned region.

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