DRSC/TRiP Functional Genomics Resources

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Protein Alignment LIMK1 and zgc:113162

DIOPT Version :10

Sequence 1:NP_511139.2 Gene:LIMK1 / 32207 FlyBaseID:FBgn0283712 Length:1257 Species:Drosophila melanogaster
Sequence 2:XP_073790729.1 Gene:zgc:113162 / 553743 ZFINID:ZDB-GENE-050522-530 Length:361 Species:Danio rerio


Alignment Length:392 Identity:135/392 - (34%)
Similarity:206/392 - (52%) Gaps:62/392 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   335 TTIPPAAGATAMTQLKEKE--------------RCSSLSKLLDEQHQAQQHSAHPQLYDLSRTQS 385
            :|..||......||.||.:              |.:.:||:.:.....:..|  |.|...|....
Zfish     7 STSGPAPDLECKTQSKETDHRHLLMMHMNSLLNRWNEISKMCEVDETTEPVS--PTLLSESTDTY 69

  Fly   386 CRV-----VQKPQRIFRATDLVIGEKLGEGFFGKVFKVTHRQSGEVMVLKELHRADEEAQRNFIK 445
            |:.     ::...|.....:....|.:|.|||.||:||.|..:.:|||:| :::.|.: |.:.::
Zfish    70 CQTDCWHPLRTTVRKLEFWEDFSAELIGTGFFSKVYKVMHGTTKKVMVVK-IYKNDVD-QNSIVR 132

  Fly   446 EVAVLRLLDHRHVLKFIGVLYKDKKLHMVTEYVAGGCLKELIHDPAQVLPWPQRVRLARDIACGM 510
            |:::|:.|.|.::::::|:..|:.||:.:.|||:||||:||:......|.|.:::.|..||:.||
Zfish   133 EISLLQKLSHPNIVRYLGICVKENKLYPILEYVSGGCLEELLARADVSLCWREKIELGCDISRGM 197

  Fly   511 SYLHSMNIIHRDLNSMNCLVR---EDRSVIVADFGLARSVDAPRLPSGNMTPGGYGSGANSDAPM 572
            :|||..||.||||||.|||:|   ..|..:|.||||||.|                    .|.| 
Zfish   198 AYLHYKNIYHRDLNSKNCLIRMSSRGREAVVTDFGLAREV--------------------GDLP- 241

  Fly   573 SPSGTLRRSKSRQRRQRYTVVGNPYWMAPEMMKGLKYDEKVDVFSFGIMLCEIIGRVEADPDFMP 637
                      :....::.::||:.:||||||::|..||.||||||||||||||:.|:.|||:.:|
Zfish   242 ----------ANDPDRKLSLVGSAFWMAPEMLRGEPYDRKVDVFSFGIMLCEILARIPADPEVLP 296

  Fly   638 RNSDFSLNQQEFREKFCAQCPEPFVKVAFVCCDLNPDMRPCFETLHVWLQRLADDLAADRVPPER 702
            |..|:.|:.|.||| ....|||..::::..||.::...||.|..|   |..| :|:|....||:.
Zfish   297 RTKDYGLDVQAFRE-LVQGCPERVLELSASCCQMDAFRRPSFSEL---LDEL-EDIAETLEPPDN 356

  Fly   703 LL 704
            .|
Zfish   357 NL 358

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LIMK1NP_511139.2 LIM1_LIMK 33..88 CDD:188750
LIM2_LIMK 95..148 CDD:188751
PDZ_LIMK-like 169..274 CDD:467236
STKc_LIMK 407..693 CDD:271056 113/288 (39%)
zgc:113162XP_073790729.1 None
Blue background indicates that the domain is not in the aligned region.

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