DRSC/TRiP Functional Genomics Resources

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Protein Alignment LIMK1 and slpr

DIOPT Version :10

Sequence 1:NP_511139.2 Gene:LIMK1 / 32207 FlyBaseID:FBgn0283712 Length:1257 Species:Drosophila melanogaster
Sequence 2:NP_001188558.1 Gene:slpr / 44111 FlyBaseID:FBgn0030018 Length:1155 Species:Drosophila melanogaster


Alignment Length:91 Identity:21/91 - (23%)
Similarity:33/91 - (36%) Gaps:11/91 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 SMGDGHF----ANVDMDGVETMVPKKSEKLPGQKKMKPEFQQPEGVAPEFTGGFMGSDEAVLAAE 102
            |.|.|::    :|...||.....|.:::.  |....:.:.||..|.    ..||.|.....|.::
  Fly    39 SYGGGYYSQQSSNQGFDGYGQQSPTQNQY--GGYGQQQQQQQSYGQ----NNGFGGFQPQQLMSD 97

  Fly   103 PSTQKTDEI-VESAESDSSSDTDYFG 127
            |......:. .:.||......|.|.|
  Fly    98 PMLNAAKQFGGQFAEQQKEKLTKYLG 123

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LIMK1NP_511139.2 LIM1_LIMK 33..88 CDD:188750 11/49 (22%)
LIM2_LIMK 95..148 CDD:188751 7/34 (21%)
PDZ_LIMK-like 169..274 CDD:467236
STKc_LIMK 407..693 CDD:271056
slprNP_001188558.1 SH3_MLK 47..104 CDD:212809 13/62 (21%)
STKc_MLK 134..389 CDD:270963
Blue background indicates that the domain is not in the aligned region.

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