DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment LIMK1 and MAP3K9

DIOPT Version :9

Sequence 1:NP_511139.2 Gene:LIMK1 / 32207 FlyBaseID:FBgn0283712 Length:1257 Species:Drosophila melanogaster
Sequence 2:XP_011535090.1 Gene:MAP3K9 / 4293 HGNCID:6861 Length:1166 Species:Homo sapiens


Alignment Length:1183 Identity:240/1183 - (20%)
Similarity:390/1183 - (32%) Gaps:359/1183 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   290 MSASTLILPLSTSASSVEVGRERLYKTPGEQGTKA---RKLRQATNASTTIPP------------ 339
            |..|..:|....||::.        ..|||.|..|   .:..:...|:..:.|            
Human     1 MEPSRALLGCLASAAAA--------APPGEDGAGAGAEEEEEEEEEAAAAVGPGELGCDAPLPYW 57

  Fly   340 -------AAGATAMTQLKEKERCSSLSKLLDEQHQA------------QQHSAHPQLYDLSRT-- 383
                   |||...:|.     |...:.::|.:..|.            |:....|..|...|:  
Human    58 TAVFEYEAAGEDELTL-----RLGDVVEVLSKDSQVSGDEGWWTGQLNQRVGIFPSNYVTPRSAF 117

  Fly   384 ----------QSCRVVQKPQRIFRA--TDLVIGEKLGEGFFGKVFKVTHRQSGEVMVLKELHRAD 436
                      .||   ..|.::...  .:|.:.|.:|.|.||||:: ......||.|....|..|
Human   118 SSRCQPGGEDPSC---YPPIQLLEIDFAELTLEEIIGIGGFGKVYR-AFWIGDEVAVKAARHDPD 178

  Fly   437 EEAQR---NFIKEVAVLRLLDHRHVLKFIGVLYKDKKLHMVTEYVAGGCLKELIHD---PAQVLP 495
            |:..:   |..:|..:..:|.|.:::...||..|:..|.:|.|:..||.|..::..   |..:| 
Human   179 EDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDIL- 242

  Fly   496 WPQRVRLARDIACGMSYLHS---MNIIHRDLNSMNCLVRE--------DRSVIVADFGLARSVDA 549
                |..|..||.||:|||.   :.||||||.|.|.|:.:        ::.:.:.||||||.   
Human   243 ----VNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLARE--- 300

  Fly   550 PRLPSGNMTPGGYGSGANSDAPMSPSGTLRRSKSRQRRQRYTVVGNPYWMAPEMMKGLKYDEKVD 614
                            .:....||.:||..                  |||||:::...:.:..|
Human   301 ----------------WHRTTKMSAAGTYA------------------WMAPEVIRASMFSKGSD 331

  Fly   615 VFSFGIMLCEII-GRVEADPDFMPRNSD-----FSLNQQEFREKFCAQCPEPFVKVAFVCCDLNP 673
            |:|:|::|.|:: |.|..      |..|     :.:...:......:.|||||.|:...|.:.:|
Human   332 VWSYGVLLWELLTGEVPF------RGIDGLAVAYGVAMNKLALPIPSTCPEPFAKLMEDCWNPDP 390

  Fly   674 DMRPCF--------------------ETLHV----W---LQRLADDLAADRVPPERLLHEIETFQ 711
            ..||.|                    ::.|.    |   :|.:.|.|.|..       .|:.|::
Human   391 HSRPSFTNILDQLTTIEESGFFEMPKDSFHCLQDNWKHEIQEMFDQLRAKE-------KELRTWE 448

  Fly   712 EWYASSEDALSPTSQRSLNNLDELVKSAVDSEISPVEKEKENMVIKP--QDIPKSPHLGKDFSPS 774
            |  ..:..||...:|..|  |....:...:.||..:|:|. |::|..  |:.|:.......|..|
Human   449 E--ELTRAALQQKNQEEL--LRRREQELAEREIDILEREL-NIIIHQLCQEKPRVKKRKGKFRKS 508

  Fly   775 GERLRDSMRARRRQRFLGAQEERRNLTPDTESKERALKKALKKCRPFGERGYLVDLRAGAELQLE 839
            ..:|:|..|......|   |.:.......|..|.::|..:  :..|......:..|||   :|.|
Human   509 RLKLKDGNRISLPSDF---QHKFTVQASPTMDKRKSLINS--RSSPPASPTIIPRLRA---IQCE 565

  Fly   840 DVRDLNTYSDVDSSCDTSLNYH------DVNN-----------------------------LPAA 869
            .|..::...:.......:|:.|      .::|                             :|..
Human   566 TVSQISWGQNTQGHLSPALSSHRLVQACSIHNFCHLSSTMCIYMHILTPGESSKTWGRSSVVPKE 630

  Fly   870 Q-EDENTVKP------------GKEELLEESTNKPSNQ----------ESQHHRLAIDDMRTRLN 911
            : |:|....|            |::||.......|..:          ||.|..|.:..:.....
Human   631 EGEEEEKRAPKKKGRTWGPGTLGQKELASGDEGSPQRREKANGLSTPSESPHFHLGLKSLVDGYK 695

  Fly   912 QCRSKFEHLEEASRRNFNQSQHSMKNFFKTPPVALKMF---------------------QRLEHE 955
            |..|...:|.:..|     |..::..|.....:||...                     .||:|.
Human   696 QWSSSAPNLVKGPR-----SSPALPGFTSLMEMALLAASWVVPIDIEEDEDSEGPGSGESRLQHS 755

  Fly   956 AAALNGGNNCPPPP-------PRTQRINQ--TPIFGRKNPP-------------------VAIVG 992
            .:.   ...|.|.|       |.:..|::  ||:....:.|                   ||::|
Human   756 PSQ---SYLCIPFPRGEDGDGPSSDGIHEEPTPVNSATSTPQLTPTNSLKRGGAHHRRCEVALLG 817

  Fly   993 -QKLQHAESLE-DLASSGVAK--QLATPAPKRSKATATTKG--GQSSNPPLFLPPSLNISVALNS 1051
             ..:..|..|. ||..:|..:  .|..|.|...:.....:|  .:||.|                
Human   818 CGAVLAATGLGFDLLEAGKCQLLPLEEPEPPAREEKKRREGLFQRSSRP---------------- 866

  Fly  1052 NGNVTTTTNTNSSCPPSASDWLPKKHKLTLPLPSAQQQRTSSNHRLPMCNNKGKTLKPLPSRTGS 1116
                     ..|:.|||...:..::..|.|..|||.....|.: .:..||:....|:........
Human   867 ---------RRSTSPPSRKLFKKEEPMLLLGDPSASLTLLSLS-SISECNSTRSLLRSDSDEIVV 921

  Fly  1117 QGIPASNCVSPTRSSRPGSPTKHLAQRHTAATAQRLTNAAATHQQQHQQQSSKTTRLNILSPEKV 1181
            ..:|.|...:|     |.||..|          ..|.|......::...||...|.:.:.:|.:.
Human   922 YEMPVSPVEAP-----PLSPCTH----------NPLVNVRVERFKRDPNQSLTPTHVTLTTPSQP 971

  Fly  1182 HRLGARLTDQKQKMREEAAATASSVGGAGCAAGTAAGSLNGHRTIGSSGTPNSAVGERRRRAAPS 1246
            .  ..|.|.....::.|....:.|....|.:....||.|       .:.:|:...||..|...|:
Human   972 S--SHRRTPSDGALKPETLLASRSPSSNGLSPSPGAGML-------KTPSPSRDPGEFPRLPDPN 1027

  Fly  1247 ---PPVRTHFNTR 1256
               ||....:||:
Human  1028 VVFPPTPRRWNTQ 1040

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LIMK1NP_511139.2 LIM1_LIMK 33..88 CDD:188750
LIM2_LIMK 95..148 CDD:188751
PDZ_signaling 172..271 CDD:238492
STKc_LIMK 407..693 CDD:271056 85/335 (25%)
MAP3K9XP_011535090.1 SH3_MLK1-3 56..113 CDD:212992 10/61 (16%)
STKc_MLK1 137..406 CDD:271047 83/317 (26%)
TyrKc 144..403 CDD:197581 83/307 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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