DRSC/TRiP Functional Genomics Resources

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Protein Alignment LIMK1 and Takl2

DIOPT Version :10

Sequence 1:NP_511139.2 Gene:LIMK1 / 32207 FlyBaseID:FBgn0283712 Length:1257 Species:Drosophila melanogaster
Sequence 2:NP_651090.2 Gene:Takl2 / 42692 FlyBaseID:FBgn0039015 Length:281 Species:Drosophila melanogaster


Alignment Length:313 Identity:80/313 - (25%)
Similarity:128/313 - (40%) Gaps:70/313 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   405 EKLGEGFFGKVFKVTHRQSGEVMVLKELHRADEEAQRNFIKEVAVLRLLDHRHVLKFIGVLYKDK 469
            |.:|.||:|.|::...|  ...:.||.:....|:  :...:|:..|....|.::::..|....:.
  Fly    17 ELIGTGFYGSVYRAVWR--NREIALKRIREGCED--KKIEREIYQLTKASHVNIVELYGTSRHEG 77

  Fly   470 KLHMVTEYVAGGCLKELIH-------DPAQVLPWPQRVRLARDIACGMSYLHSMN---IIHRDLN 524
            ...::.|:|.||.|...:|       ..|....|      |..||.|::|||.|.   :||||:.
  Fly    78 CALLLMEFVDGGSLSSFLHAKSKPSYSHAHAFNW------AHQIAQGIAYLHGMQPKAVIHRDIK 136

  Fly   525 SMNCLVRE-DRSVIVADFGLARSVDAPRLPSGNMTPGGYGSGANSDAPMSPSGTLRRSKSRQRRQ 588
            .:|.|:.| ...:.:.|||..  ||..:..|.|                  :||.|         
  Fly   137 PLNTLLCEKGLKLKICDFGTV--VDLSQSISCN------------------AGTCR--------- 172

  Fly   589 RYTVVGNPYWMAPEMMKGLKYDEKVDVFSFGIMLCEIIGRVEADPDFMPRNSDFSL----NQQEF 649
                     :.|||:::|.|.|||.||:|:.|...||:.|.|   .|...|:.|.|    |:.|.
  Fly   173 ---------YKAPEVLQGNKPDEKCDVYSWAITFWEILSRKE---PFEQYNTLFELYMAINEGER 225

  Fly   650 REKFC--AQCPEPFVKVAFVCCDLNPDMRPCFETLHVWLQRLADDLAADRVPP 700
            .:..|  :.||...|.:.:...|.:...|...|.:...:.|:..:  |..:||
  Fly   226 PDLSCIMSGCPADIVALLYASWDPDISKRFSMELISQSMGRILSE--AGSIPP 276

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LIMK1NP_511139.2 LIM1_LIMK 33..88 CDD:188750
LIM2_LIMK 95..148 CDD:188751
PDZ_LIMK-like 169..274 CDD:467236
STKc_LIMK 407..693 CDD:271056 76/302 (25%)
Takl2NP_651090.2 Protein Kinases, catalytic domain 19..268 CDD:473864 76/299 (25%)
Blue background indicates that the domain is not in the aligned region.

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