DRSC/TRiP Functional Genomics Resources

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Protein Alignment LIMK1 and Tak1

DIOPT Version :10

Sequence 1:NP_511139.2 Gene:LIMK1 / 32207 FlyBaseID:FBgn0283712 Length:1257 Species:Drosophila melanogaster
Sequence 2:NP_524080.1 Gene:Tak1 / 39659 FlyBaseID:FBgn0026323 Length:678 Species:Drosophila melanogaster


Alignment Length:739 Identity:160/739 - (21%)
Similarity:278/739 - (37%) Gaps:222/739 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   399 TDLVIGEKLGEGFFGKVFKVTHRQSGEVMVLKELHRADEEAQRNFIKEVAVLRLLDHRHVLKFIG 463
            :::.:.||:|.|.:|.|.|...|.  :::.:||...:.|  |::..|||..|..:.|.:::...|
  Fly    17 SEITLREKVGHGSYGVVCKAVWRD--KLVAVKEFFASAE--QKDIEKEVKQLSRVKHPNIIALHG 77

  Fly   464 VLYKDKKLHMVTEYVAGGCLKELIHDP-------AQVLPWPQRVRLARDIACGMSYLHSMN---I 518
            :....:..:::.|:..||.|...:|..       |..:.|      ||..|.|::|||:|.   :
  Fly    78 ISSYQQATYLIMEFAEGGSLHNFLHGKVKPAYSLAHAMSW------ARQCAEGLAYLHAMTPKPL 136

  Fly   519 IHRDLNSMNCLV-REDRSVIVADFGLARSVDAPRLPSGNMTPGGYGSGANSDAPMSPSGTLRRSK 582
            ||||:..:|.|: .:.|::.:.|||....       ...|.....||.|                
  Fly   137 IHRDVKPLNLLLTNKGRNLKICDFGTVAD-------KSTMMTNNRGSAA---------------- 178

  Fly   583 SRQRRQRYTVVGNPYWMAPEMMKGLKYDEKVDVFSFGIMLCEIIGRVEADPDFMPRNSDFSLNQQ 647
                           |||||:.:|.||.||.|:||:.|:|.|::.|.:   .|...::.:::..:
  Fly   179 ---------------WMAPEVFEGSKYTEKCDIFSWAIVLWEVLSRKQ---PFKGIDNAYTIQWK 225

  Fly   648 EF---REKFCAQCPEPFVKVAFVCCDLNPDMRPCFE-TLHVWLQRLADDLAADRVPPERLLHE-- 706
            .:   |......||:....:...|....|:.||..: .:.|..:.:.|...||:......:::  
  Fly   226 IYKGERPPLLTTCPKRIEDLMTACWKTVPEDRPSMQYIVGVMHEIVKDYTGADKALEYTFVNQQI 290

  Fly   707 --------IETFQEWYASSEDALSPTSQR-----SLN-NLDELV------------KSAVDSEIS 745
                    :....:..:|.|..|||:|.:     :.| |::.:.            .|:..|:|:
  Fly   291 VTKESDGTVAAQPDSLSSQEGELSPSSTQLTPTTAANANVNAIAISKTTTSSMTENTSSTSSDIT 355

  Fly   746 PVEK-EKEN-----MVIKPQD-IPKSPHLGKDFSPSGERLRDSMRARRRQRFLGAQEERRNLTPD 803
            |... :.:|     ||....| ||:        ..|.|...||.                |||..
  Fly   356 PTNSGQLDNNPLFYMVTNRWDAIPE--------EESNESRNDSF----------------NLTSS 396

  Fly   804 TESKER--ALKKA--LKKCRPFGERGYLVDLRA-GAELQ-----------LEDVRDLNTYSD--- 849
            .|:.:|  .::..  |..|:|..:  ..:|:.| |.:|.           ..|.|:..|.:|   
  Fly   397 AEATQRLETIRNGMILMACKPMEQ--LTLDVEANGFDLSPSESSSSSTNAKSDGRERLTVTDTKP 459

  Fly   850 VDSSCDTSLN----------------------------YHD---VNNLPA---AQEDENTVKPGK 880
            |..:.|.|.|                            .|:   ||:|..   ..||||   .|.
  Fly   460 VMMTTDLSNNNGGIHAHSNGLLSHANGWQARDEELQEQEHEQEIVNSLDVDVDPDEDEN---DGT 521

  Fly   881 EELLEESTNK--------PSNQESQ----HHR------LAIDDMRTRLNQCRS-KFEHLEEASRR 926
            |:.|.|..:.        |::.|||    .||      |::|   |.|...:. |.:.:.:..|.
  Fly   522 EQSLAEILDPELQPEPPIPNDAESQLIYRDHRHMAKEYLSVD---TNLYYAQDFKDKLIVQMDRT 583

  Fly   927 NFNQSQHSMKNFFKTPPVALKMFQRLEHEAAA--LNGGNNCPP-PPPRTQRINQTPIFGRKNPPV 988
            ...|.|..::. .|.......::..|:.:.|:  |..|::..| |.|...:: |.|   ..:||:
  Fly   584 EREQKQELLRK-MKDKEGLQSLYNNLQQQYASRQLAAGHHPQPHPHPHPNQL-QHP---HSHPPM 643

  Fly   989 ---------AIVGQKLQHAESLED 1003
                     .:.|.....:||:|:
  Fly   644 HFLQDEGCGLLPGSVCGGSESVEE 667

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LIMK1NP_511139.2 LIM1_LIMK 33..88 CDD:188750
LIM2_LIMK 95..148 CDD:188751
PDZ_LIMK-like 169..274 CDD:467236
STKc_LIMK 407..693 CDD:271056 72/300 (24%)
Tak1NP_524080.1 STKc_TAK1 25..275 CDD:270960 72/300 (24%)
Blue background indicates that the domain is not in the aligned region.

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