DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment LIMK1 and TESK2

DIOPT Version :9

Sequence 1:NP_511139.2 Gene:LIMK1 / 32207 FlyBaseID:FBgn0283712 Length:1257 Species:Drosophila melanogaster
Sequence 2:NP_009101.2 Gene:TESK2 / 10420 HGNCID:11732 Length:571 Species:Homo sapiens


Alignment Length:549 Identity:170/549 - (30%)
Similarity:250/549 - (45%) Gaps:158/549 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   394 RIFRATDLVIGEKLGEGFFGKVFKVTHRQSGEVMVLKELHRADEEAQRNFIKEVAVLRLLDHRHV 458
            |:.|..|... ||:|.|||.:||||.||.||:||.||....:...|  |.:|||.::..|.|.::
Human    52 RLTRLDDFTC-EKIGSGFFSEVFKVRHRASGQVMALKMNTLSSNRA--NMLKEVQLMNRLSHPNI 113

  Fly   459 LKFIGVLYKDKKLHMVTEYVAGGCLKELIHDPAQVLPWPQRVRLARDIACGMSYLHSMNIIHRDL 523
            |:|:||.....:||.:|||:..|.|::|: |....|||..||:||.|||.|:||||...|.||||
Human   114 LRFMGVCVHQGQLHALTEYINSGNLEQLL-DSNLHLPWTVRVKLAYDIAVGLSYLHFKGIFHRDL 177

  Fly   524 NSMNCLVREDR---SVIVADFGLARSVDAPRLPSGNMTPGGYGSGANSDAPMSPSGTLRRSKSRQ 585
            .|.|||::.|.   |.:|||||||.     ::|..:|     ||                     
Human   178 TSKNCLIKRDENGYSAVVADFGLAE-----KIPDVSM-----GS--------------------- 211

  Fly   586 RRQRYTVVGNPYWMAPEMMKGLKYDEKVDVFSFGIMLCEIIGRVEADPDFMPRNSDFSLNQQEFR 650
              ::..|||:|:|||||:::...|:||.||||:||:|||||.|::||||::||..:|.|:...| 
Human   212 --EKLAVVGSPFWMAPEVLRDEPYNEKADVFSYGIILCEIIARIQADPDYLPRTENFGLDYDAF- 273

  Fly   651 EKFCAQCPEPFVKVAFVCCDLNPDMRPCF----ETLHVWLQRLADD------------------- 692
            :.....||..|:::.|.||:::|.:||.|    :||...|.||.::                   
Human   274 QHMVGDCPPDFLQLTFNCCNMDPKLRPSFVEIGKTLEEILSRLQEEEQERDRKLQPTARGLLEKA 338

  Fly   693 -----LAA--DRVP-----PERLLHEIETFQEWYASSE-DALSPTSQRSLNNLDELVK----SAV 740
                 |::  |::|     |.|.:        |.:.|: |..|....|:::.||...:    :|.
Human   339 PGVKRLSSLDDKIPHKSPCPRRTI--------WLSRSQSDIFSRKPPRTVSVLDPYYRPRDGAAR 395

  Fly   741 DSEISPVEKEKENM--VIKPQDIPKSPHLGKDF-----SPSGERLRDSMRAR----RRQR----- 789
            ..:::|....::.|  .||..|:|....:...|     .|....|.|.....    ||.|     
Human   396 TPKVNPFSARQDLMGGKIKFFDLPSKSVISLVFDLDAPGPGTMPLADWQEPLAPPIRRWRSLPGS 460

  Fly   790 ----------FLGAQEERRNLTPDTESKERALKKALKKCRPFGERGYLVDLRAGAELQLEDVRDL 844
                      |:|.:|   :|:.....:..:||..:|:..||         ||.|          
Human   461 PEFLHQEACPFVGREE---SLSDGPPPRLSSLKYRVKEIPPF---------RASA---------- 503

  Fly   845 NTYSDVDSSCDTSLNYHDVNNLPAAQEDE 873
                                 |||||..|
Human   504 ---------------------LPAAQAHE 511

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LIMK1NP_511139.2 LIM1_LIMK 33..88 CDD:188750
LIM2_LIMK 95..148 CDD:188751
PDZ_signaling 172..271 CDD:238492
STKc_LIMK 407..693 CDD:271056 121/316 (38%)
TESK2NP_009101.2 PKc_TESK 64..316 CDD:271057 119/288 (41%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 521..571
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D119463at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.920

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