DRSC/TRiP Functional Genomics Resources

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Protein Alignment LIMK1 and LOC101730247

DIOPT Version :10

Sequence 1:NP_511139.2 Gene:LIMK1 / 32207 FlyBaseID:FBgn0283712 Length:1257 Species:Drosophila melanogaster
Sequence 2:XP_031750855.1 Gene:LOC101730247 / 101730247 XenbaseID:XB-GENE-29084411 Length:846 Species:Xenopus tropicalis


Alignment Length:962 Identity:253/962 - (26%)
Similarity:379/962 - (39%) Gaps:298/962 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   363 DEQHQAQQHSA--------HPQLYDLSRTQSCRVVQKPQRIFRATDLVIGEKLGEGFFGKVFKVT 419
            |...:...|||        :||.....|..|.|.::.........|....||:|.|||.:||||.
 Frog     4 DGDSELGTHSALDIHGLTPNPQGTGRLRPSSYRALRSAVSNLARIDDFYCEKIGSGFFSEVFKVR 68

  Fly   420 HRQSGEVMVLKELHRADEEAQRNFIKEVAVLRLLDHRHVLKFIGVLYKDKKLHMVTEYVAGGCLK 484
            |||||::||||........|  |.::||.::..|.|.::|:|:||..:..:||.:|||:.||.|:
 Frog    69 HRQSGQIMVLKMNKMMSNRA--NMLREVQLMNRLCHPNILRFMGVCVQQGQLHALTEYINGGNLE 131

  Fly   485 ELIHDPAQVLPWPQRVRLARDIACGMSYLHSMNIIHRDLNSMNCLVREDRS---VIVADFGLARS 546
            :|:..| :.|.|.:||:|:.|||.|:.||||..:.||||.|.|||||.:.|   |:|.|||||. 
 Frog   132 QLLQSP-EPLGWGERVKLSLDIARGLRYLHSKGVFHRDLTSKNCLVRCEESGYTVVVGDFGLAE- 194

  Fly   547 VDAPRLPSGNMTPGGYGSGANSDAPMSPSGTLRRSKSRQRRQRYTVVGNPYWMAPEMMKGLKYDE 611
                ::|..:.|           .|:|                  |||:|||||||:::|..|:|
 Frog   195 ----KIPDHSQT-----------EPLS------------------VVGSPYWMAPEVLRGEVYNE 226

  Fly   612 KVDVFSFGIMLCEIIGRVEADPDFMPRNSDFSLNQQEFREKFCAQCPEPFVKVAFVCCDLNPDMR 676
            |.|||:|||:|||:|.|:.||||::||..:|.|:.:.|||.....||..|:::||.||.::|:.|
 Frog   227 KADVFAFGIILCELIARIPADPDYLPRTENFGLDIKAFRELVPVDCPSAFLQLAFHCCRMSPEAR 291

  Fly   677 PCFETLHVWLQRLADDLAADR---VPPER-------------------LLHEIETFQEW------ 713
            |.|..:..||:.|.|::  ||   :||.|                   .||.....|.|      
 Frog   292 PSFSEVSQWLEALLDNM--DRKKVIPPLRSANSLEDETISPRNGGSQSTLHSTNQQQAWDTPSPS 354

  Fly   714 ----YASSEDALSPTSQRSLNNL-------------------------DELVKSAVD--SEISPV 747
                ..|..|..||..|...::|                         |...||.:.  .|:.|.
 Frog   355 DQRLSRSQSDMFSPQPQDPYDDLLRDTPARVNPFSQREDLKGGRIKLFDTPSKSVISLTFELPPP 419

  Fly   748 EKEKENMVIKPQDI--------------------PKSPHLGKDFSP--SGERLRDSMRARRRQRF 790
            ...:.|..:.|:.|                    |.||.:|:..||  :|..|         ||.
 Frog   420 ITYQMNTPVTPEPIMEAQCDFSEPTARPRRCRSLPSSPEIGRKGSPCTTGTPL---------QRP 475

  Fly   791 LGAQEERRNLTPDTESKERALKKA----LKKCRPFGERGYLVDLRAGAELQ-----LEDVR---- 842
            :....|:||:      |.|.|..|    ....||          :|....|     |||.:    
 Frog   476 VQWASEKRNI------KGRKLISANSVETDTNRP----------KANGVPQEPHRRLEDPQHSVG 524

  Fly   843 -----DLNTYSDVDSSCDTSLNYHDVNNLPAAQEDENTVKPGKEELLEESTNKPSNQESQHHRLA 902
                 .||:..|:|..|                        |:::.|..::....:.|.|:.:|.
 Frog   525 ATPSCSLNSNGDMDLLC------------------------GEDQSLSRASVTSGDHERQNEQLP 565

  Fly   903 IDDMRTRLNQCRSKFEHLEEASRRNFNQSQHSMKNFFKTPPVALKMFQ----------RLEHEAA 957
            ::....:..:|      :||..    |..|      |...|:.|:|.|          .::|:..
 Frog   566 LESAHGKTVEC------VEETC----NGGQ------FTVDPIPLRMGQVWGGENLVKPEIDHKWV 614

  Fly   958 ALNGGNNCPP--PPPRTQRINQTPIFGRKNPPVAI--VGQKLQHAESLED------------LAS 1006
               ||.:.|.  .||...|..:.....:::|.|.:  .|:.:..:.|.:.            |.|
 Frog   615 ---GGTSSPEYGSPPHQDRTGELNRHSQQDPCVDLPETGEPMDCSSSPDSTEENTFCQRPSRLRS 676

  Fly  1007 SGVAKQLATPAPKRSKATATTKGGQSSNPPLFL----PPSLNISVALNSNGNVTTTTNTNSSCPP 1067
            :|..  :|...|.:|..::|....:|.:||:..    ||..:..:.|:.|.||..:         
 Frog   677 NGPI--IAPSPPPQSSLSSTPSSSRSPSPPISTWQQEPPVAHNRLKLSDNNNVVCS--------- 730

  Fly  1068 SASDWLPKKHKLTL----------PLP----------SAQQQRTSSNHRL--------PMCNNKG 1104
            ....|:...|..:|          .||          |......|||..|        |.|...|
 Frog   731 KPLGWVGSLHPRSLGSLEGNLWEDSLPGLGCEGGESGSTAPLHASSNSVLDHEETVTCPACCLGG 795

  Fly  1105 -------KTLKPLPSRTGSQGIPAS----NCVSPTRSSRPGSPTKHLAQRHT 1145
                   :...|..||..:....||    |......:.||| |::.:.:..|
 Frog   796 FSFISVCRRTPPDSSRYQNLNCEASRGLINTAPRISAPRPG-PSRKIPEAQT 846

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LIMK1NP_511139.2 LIM1_LIMK 33..88 CDD:188750
LIM2_LIMK 95..148 CDD:188751
PDZ_LIMK-like 169..274 CDD:467236
STKc_LIMK 407..693 CDD:271056 123/288 (43%)
LOC101730247XP_031750855.1 PKc_TESK 56..305 CDD:271057 121/285 (42%)
Blue background indicates that the domain is not in the aligned region.

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