DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pits and Irf2bp2

DIOPT Version :9

Sequence 1:NP_001138192.1 Gene:Pits / 32205 FlyBaseID:FBgn0030400 Length:630 Species:Drosophila melanogaster
Sequence 2:XP_003751945.2 Gene:Irf2bp2 / 679357 RGDID:1589517 Length:571 Species:Rattus norvegicus


Alignment Length:707 Identity:223/707 - (31%)
Similarity:287/707 - (40%) Gaps:227/707 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 TKRQHCYLCDLPRMPWAMINDFSEAVCRGCVNYEGADRIEAVLDAARQMKRLHPASKQQRSHENG 69
            ::||.||||||||||||||.||:|.|||||||||||||:|.|::.|||:||.|...::.||    
  Rat    11 SRRQSCYLCDLPRMPWAMIWDFTEPVCRGCVNYEGADRVEFVIETARQLKRAHGCFQEGRS---- 71

  Fly    70 EVSAAAAAAVVLQQQQQLQVGPVPGQGPGSHRGGGGGGPPGAPPGSGGPGPSGAGSL-----SSL 129
                                                  |.||.|.|..|.|..|..|     ..|
  Rat    72 --------------------------------------PTGAQPASAKPPPLSAKDLLLQPPPQL 98

  Fly   130 GNAVAAAAAAAAVHHHHQMPYQMPVPRIGPPLDYPVKLEDAPGGGVRPVRISHMTPHHLPPNATR 194
            |:|.|.||.|.|:..                  ||:..:.||       |::       ...:||
  Rat    99 GHAGAEAARAQAMER------------------YPLAPDRAP-------RLA-------SEFSTR 131

  Fly   195 GGGGAPGGGVPTAGSGGGSLPPALSVNLKRPPSEDVDVDVSQQQQQSGHGLAP------DGSAGN 253
            .|.|.|...........|.|.|.....|:.||    :::......:..|.:.|      :|||..
  Rat   132 AGAGLPQSAASQPSPANGILVPNGFSKLEEPP----ELNRQSPNPRRAHAVPPTLVPLVNGSAAL 192

  Fly   254 SLSAGGGVSGGCPPGIKRSAMDDPSGVGGRPPLTRGESLPAAVSYV----PERQLSGLRDKQQPV 314
            .||.....:        .:|:....|:|.:|........||:||..    ..|:.|  ::|.||.
  Rat   193 GLSGRAAAT--------LAAVSGTPGLGAQPAELGTHKRPASVSSAAAEHEAREQS--KEKAQPA 247

  Fly   315 RAPSFDASTFKAANPIPNPIPHHLHIAEHMSPASRRNGSSPPSGPLPPRSVHSPNSSGSSSGR-R 378
                                        |.|||...:|::..|           ..|..|:|: |
  Rat   248 ----------------------------HRSPADSLSGTTGAS-----------ELSAESAGKGR 273

  Fly   379 SSGSRHVSSTTVTSSEV--------GGSNPGQ-------AVVAGG--LGGGGGGGPGSNAAS--- 423
            :.|.:..:|...|..:.        |.|.|.:       |:.|.|  ||....|..||.|.:   
  Rat   274 APGEQDWASRPKTVRDTLLALHHQHGHSGPFESKFKKEPALTAAGRLLGFEANGANGSKAVARTA 338

  Fly   424 ----------GQLGGPS-GGSGQ--LSCTSGG------PGGSASSGSGGNGAIGPASMAPNSVAG 469
                      |::|.|. .|..|  ||.::.|      |..|..|..       |.:.:|:|...
  Rat   339 RKRKPSPEPEGEVGPPKINGEAQPWLSTSTEGLKIPITPTSSFVSPP-------PPTASPHSNRT 396

  Fly   470 DGSPAGGNGPS-------------GSNGS------------GGSVNPGPGSSGSQGGGGGGTPLA 509
            ....|..||.|             ||:.|            ..|..|.|.|...:..|    |..
  Rat   397 TPPEAAQNGQSPMAALILVADNAGGSHASKDTTQVHSTTRRNSSSPPSPSSMNQRRLG----PRE 457

  Fly   510 SGGGSAGS-GGLGGAPGSSAASNSAAAAAAAAAQNATLKCTLCQERLEDTHFVQCPSVNHHKFCF 573
            .||.:.|| |||.....:|...:|.||       :|.|.||||.||||||||||||||..|||||
  Rat   458 VGGQATGSTGGLEPVHPASLPDSSLAA-------SAPLCCTLCHERLEDTHFVQCPSVPSHKFCF 515

  Fly   574 PCSRESIKRQNGLGNEVYCPSGDRCPLANSVIPWAFMQGEITTILGEEVKVKKERES 630
            ||||:|||:| |...|||||||::|||..|.:|||||||||.|||..:|||||||:|
  Rat   516 PCSRQSIKQQ-GASGEVYCPSGEKCPLVGSNVPWAFMQGEIATILAGDVKVKKERDS 571

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PitsNP_001138192.1 IRF-2BP1_2 6..57 CDD:288155 39/50 (78%)
zf-C3HC4 548..593 CDD:278524 35/44 (80%)
Irf2bp2XP_003751945.2 IRF-2BP1_2 12..63 CDD:402721 39/50 (78%)
PHA03247 <70..408 CDD:223021 97/471 (21%)
vRING-HC_IRF2BP1_like 488..543 CDD:319425 43/55 (78%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166352347
Domainoid 1 1.000 205 1.000 Domainoid score I2821
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 289 1.000 Inparanoid score I2721
OMA 1 1.010 - - QHG46167
OrthoDB 1 1.010 - - D1156771at2759
OrthoFinder 1 1.000 - - FOG0001640
OrthoInspector 1 1.000 - - otm45945
orthoMCL 1 0.900 - - OOG6_110480
Panther 1 1.100 - - O PTHR10816
Phylome 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1040
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1212.000

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