DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pits and irf2bp1

DIOPT Version :9

Sequence 1:NP_001138192.1 Gene:Pits / 32205 FlyBaseID:FBgn0030400 Length:630 Species:Drosophila melanogaster
Sequence 2:NP_001037819.2 Gene:irf2bp1 / 556852 ZFINID:ZDB-GENE-050420-389 Length:605 Species:Danio rerio


Alignment Length:756 Identity:230/756 - (30%)
Similarity:298/756 - (39%) Gaps:291/756 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 TKRQHCYLCDLPRMPWAMINDFSEAVCRGCVNYEGADRIEAVLDAARQMKRLHPASKQQRSHENG 69
            ::||.|||||||:||||||.||||||||||||||||||||.::|.|||:||.|            
Zfish     9 SRRQWCYLCDLPKMPWAMIWDFSEAVCRGCVNYEGADRIELLIDTARQLKRTH------------ 61

  Fly    70 EVSAAAAAAVVLQQQQQLQVGPVPGQGPGSHRGGGGGGPPGAPPGSGGPGPSGAGSLSS------ 128
                            .:|.|..||..|     ||..||      :|..||..||...|      
Zfish    62 ----------------VMQDGRSPGPQP-----GGKHGP------AGKEGPMEAGRPPSERYERG 99

  Fly   129 LGNAVAAAAAAAAVHHHHQMPYQMPVPRIGPPLDYPVKLEDAPGGGVRPVRISHMTP-------H 186
            .|..|:|           ::|..:|            :|||   ||  |..:|..:|       .
Zfish   100 RGEYVSA-----------RLPNGLP------------RLED---GG--PPEVSRQSPTARRTLVG 136

  Fly   187 HLPPN-ATRGGGGAPGGGV------PTAGSGGGSLP-PALS-VNLKRPPSEDVDVDVS------- 235
            .:||| ..:|..|||.|.:      |.|||...::| |.|: ::.::..|..:.|.|.       
Zfish   137 AVPPNLMAQGLVGAPHGLLTAMPLNPRAGSAALTIPAPMLNEISKRQALSMGLSVGVPSFIAPEF 201

  Fly   236 ----QQQQQSGHGLA------------------PDGSAGNSLSAGGGVSGGCPPGIKRSAMDD-- 276
                :::|::...||                  |...|.::||       ||.|...|...|.  
Zfish   202 EKEFKEKQRNAEALAELSESVRNRADDWAGRPKPMRDALHTLS-------GCTPFNVRFKKDHGL 259

  Fly   277 -----------------------PSGVGGRPP----LTR----------GESLPAAVSYVPERQL 304
                                   |.|.|...|    |.:          |:.:.:...||...:.
Zfish   260 VGRVFAFDAKLMVEFELKIFIEYPCGSGNVFPSILALVKHMFHDSQKDTGKVINSGYKYVEYEKR 324

  Fly   305 SGLRDKQQPVRAPSFDASTFK---AANPIPNP--------IPHHL-HIAEHMSPASRRNGSSP-P 356
            .|..|.:......|.....||   |.:.:|.|        :|..| ||.....|..||..:|| |
Zfish   325 HGTGDWRLLSELLSDAVRAFKEMPAPDALPQPYLDASCSMLPTALCHIGRPTQPRVRRRKASPDP 389

  Fly   357 SG-------------PL---PPRSVHSPNSSGSSSGRRSSGSRHVSSTTVTSSEVGGSNPGQAV- 404
            .|             ||   |....|.|.:|.:|:|:...|.              ||:|.... 
Zfish   390 DGAERMSSEELRQHWPLSAYPGIPGHMPATSLASAGQAPEGH--------------GSDPSPITA 440

  Fly   405 ---VAGGLG-GGGGGGPGSNAASGQLG-------GPSGGSGQLSCTSGGPGGSASSGSGGNGAIG 458
               ||..:| .....||||:..|...|       .|.||..:|:..:|.|...:|:|       |
Zfish   441 LMSVADNVGTASSKDGPGSSGHSANAGRQNSTSPSPGGGQRRLASRNGEPSAGSSTG-------G 498

  Fly   459 PASMAPNSVAGDGSPAGGNGPSGSNGSGGSVNPGPGSSGSQGGGGGGTPLASGGGSAGSGGLGGA 523
            ||::...|..     .||.|                     ..||||.||.              
Zfish   499 PATVTDQSAV-----MGGEG---------------------SAGGGGAPLC-------------- 523

  Fly   524 PGSSAASNSAAAAAAAAAQNATLKCTLCQERLEDTHFVQCPSVNHHKFCFPCSRESIKRQNGLGN 588
                                    ||:||||||||||||||||..|||||||:|:.|:|| |.|:
Zfish   524 ------------------------CTICQERLEDTHFVQCPSVAGHKFCFPCTRDFIRRQ-GPGS 563

  Fly   589 EVYCPSGDRCPLANSVIPWAFMQGEITTILGEEVKVKKERE 629
            |||||||::|||..|.:|||||||||:|||..:|||||||:
Zfish   564 EVYCPSGEKCPLVGSNVPWAFMQGEISTILAGDVKVKKERD 604

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PitsNP_001138192.1 IRF-2BP1_2 6..57 CDD:288155 41/50 (82%)
zf-C3HC4 548..593 CDD:278524 34/44 (77%)
irf2bp1NP_001037819.2 IRF-2BP1_2 13..61 CDD:288155 39/47 (83%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 61..130 29/135 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 373..517 43/190 (23%)
Cys-rich 524..571 37/47 (79%)
zf-C3HC4_2 524..568 CDD:290634 34/44 (77%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170594278
Domainoid 1 1.000 97 1.000 Domainoid score I7163
eggNOG 1 0.900 - - E1_KOG3579
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 269 1.000 Inparanoid score I2991
OMA 1 1.010 - - QHG46167
OrthoDB 1 1.010 - - D1156771at2759
OrthoFinder 1 1.000 - - FOG0001640
OrthoInspector 1 1.000 - - otm26217
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR10816
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1040
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1312.960

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