DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pits and irf2bp2b

DIOPT Version :9

Sequence 1:NP_001138192.1 Gene:Pits / 32205 FlyBaseID:FBgn0030400 Length:630 Species:Drosophila melanogaster
Sequence 2:NP_999917.1 Gene:irf2bp2b / 406614 ZFINID:ZDB-GENE-040426-2574 Length:501 Species:Danio rerio


Alignment Length:669 Identity:209/669 - (31%)
Similarity:261/669 - (39%) Gaps:221/669 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 TKRQHCYLCDLPRMPWAMINDFSEAVCRGCVNYEGADRIEAVLDAARQMKRLHPASKQQRSHENG 69
            ::||.||||||||||||||.||:|.|||||||||||||||.|::.|||:||.|            
Zfish     9 SRRQSCYLCDLPRMPWAMIWDFTEPVCRGCVNYEGADRIEFVIETARQLKRAH------------ 61

  Fly    70 EVSAAAAAAVVLQQQQQLQVGPVPGQGPGSHRGGGGGGPPG--------APPGSGGPGPSGAGSL 126
                                |...|:.||.      .|.||        |.|||..|.|.....|
Zfish    62 --------------------GFQEGRSPGP------VGKPGKDMQSINHAEPGSRPPQPLDRYPL 100

  Fly   127 SS-----LGNAVAAAAAAAAVHHHHQMPYQMPVPRIGPPLDYPVKLEDAPGGGVRPVRISHMTPH 186
            :|     ||            ..:.:....:|||...|..|.|.:|                  :
Zfish   101 TSDRPPRLG------------AEYQRQANGIPVPNGFPKPDEPPEL------------------N 135

  Fly   187 HLPPNATRGGGGAPGGGVPTAGSGGGSLPPALSVNLKRPPSEDVDVDVSQQQQQSGHGLAPDGSA 251
            ...||..| .|..|...||..   .||:||..::|                              
Zfish   136 RQSPNPRR-TGAIPPNLVPLV---NGSMPPVHALN------------------------------ 166

  Fly   252 GNSLSAGGGVSGGCPPGI------KRS----------AMDDPSGVGGRPPLTRGESLPAAVSYVP 300
                  |..|..|.|||.      ||:          :|.|||  .|...:.........|..:.
Zfish   167 ------GRSVQMGIPPGALAEHVGKRADDMKDKHRADSMSDPS--DGHKRVDEWTQKGKTVREMM 223

  Fly   301 ERQLSGLRDKQQPVRAP---SFDAST--FKAANPIPNPIPHHLHIAEHMSP-------ASRRNGS 353
            ..|....|.|::....|   |:::|:  .|....     .|...|....||       |.:.||.
Zfish   224 TLQTLDSRFKKEHAALPHRMSYESSSGALKTDRG-----KHSRGIKRKTSPEPDGEGIAVKLNGE 283

  Fly   354 SPPSGPLPPRSVHSPNSS--GSSSGRRSSGSRHVSSTTVTSSEVGGSNPGQAVVAGGLGGGGGGG 416
            ..|..|.|...:..|:::  |.::...|:.|.| |.||...:.....| .|:.:|..:......|
Zfish   284 GQPWLPSPSEVLKMPSAALPGFAAAPPSTISPH-SRTTPPEAATAVQN-SQSPMAALILAADNAG 346

  Fly   417 PGSNAASGQLGGPSGGSGQLSCTSGGPGGSASSGSGGNGAIGPASMAPNSVAGDGSPA-GGNGPS 480
            .||         |.....|:..|:....|..:|||       |.|.:    ||...|| |..|.:
Zfish   347 TGS---------PKDAGNQVHSTTTSAAGRRNSGS-------PQSPS----AGQRRPALGATGTA 391

  Fly   481 GSNGSGGSVNPGPGSSGSQGGGGGGTPLASGGGSAGSGGLGGAPGSSAASNSAAAAAAAAAQNAT 545
            ...|    ::|..|...|                        .|.||...:|           ..
Zfish   392 HIPG----MDPQAGHPHS------------------------IPDSSVPPSS-----------VP 417

  Fly   546 LKCTLCQERLEDTHFVQCPSVNHHKFCFPCSRESIKRQNGLGNEVYCPSGDRCPLANSVIPWAFM 610
            |.||||.||||||||||||||..|||||||||||||:|...| |||||||::|||..|.:|||||
Zfish   418 LCCTLCHERLEDTHFVQCPSVPSHKFCFPCSRESIKQQGATG-EVYCPSGEKCPLVGSNVPWAFM 481

  Fly   611 QGEITTILGEEVKVKKERE 629
            ||||.|||..:|||||||:
Zfish   482 QGEIATILAGDVKVKKERD 500

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PitsNP_001138192.1 IRF-2BP1_2 6..57 CDD:288155 40/50 (80%)
zf-C3HC4 548..593 CDD:278524 36/44 (82%)
irf2bp2bNP_999917.1 IRF-2BP1_2 10..61 CDD:288155 40/50 (80%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 60..155 32/163 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 240..277 8/41 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 306..330 6/24 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 344..410 23/113 (20%)
Cys-rich 420..467 39/47 (83%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170594275
Domainoid 1 1.000 97 1.000 Domainoid score I7163
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 269 1.000 Inparanoid score I2991
OMA 1 1.010 - - QHG46167
OrthoDB 1 1.010 - - D1156771at2759
OrthoFinder 1 1.000 - - FOG0001640
OrthoInspector 1 1.000 - - otm26217
orthoMCL 1 0.900 - - OOG6_110480
Panther 1 1.100 - - O PTHR10816
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1040
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1212.000

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