DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pits and irf2bp2a

DIOPT Version :9

Sequence 1:NP_001138192.1 Gene:Pits / 32205 FlyBaseID:FBgn0030400 Length:630 Species:Drosophila melanogaster
Sequence 2:NP_956275.1 Gene:irf2bp2a / 335866 ZFINID:ZDB-GENE-030131-7809 Length:491 Species:Danio rerio


Alignment Length:678 Identity:198/678 - (29%)
Similarity:251/678 - (37%) Gaps:251/678 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 KRQHCYLCDLPRMPWAMINDFSEAVCRGCVNYEGADRIEAVLDAARQMKRLHPASKQQRSHENGE 70
            :||.||||||||||||||.||:|.|||||||||||||||.|::.|||:||.|       ..::|.
Zfish    10 RRQSCYLCDLPRMPWAMIWDFTEPVCRGCVNYEGADRIEFVIETARQLKRAH-------GFQDGR 67

  Fly    71 VSAAAAAAVVLQQQQQLQVGPVPGQGPGSHRGG---GGGGPPGAPPGSGGPGPSGAGSLSS---- 128
            .:                       |||....|   ...|.||:.|    |.|.....|||    
Zfish    68 PA-----------------------GPGKQLPGKEIHASGDPGSRP----PQPLDRYPLSSERPP 105

  Fly   129 -LGNAVAAAAAAAAVHHHHQMPYQMPVPR-IGPPLDYPVKLEDAPGGGVRPVRISHMTPHHLP-- 189
             ||....:|..|..:          |||. ...|.|.|.....:|    .|.|.|.:.|:.:|  
Zfish   106 RLGAEYQSARQANGI----------PVPNGFSKPDDPPELNRQSP----NPRRTSGVPPNLVPLV 156

  Fly   190 -PNATRGGGGAPGGGVPTAGSGGGSLPPALSVNLKRPPSEDVDVDVSQQQQQSGHGLAPDGSAGN 253
             .:......|.||   ..:..||...|.::|       |.:.|.|     :.....|.|:.|.|:
Zfish   157 NGSMAHAMNGRPG---QMSDLGGNKRPASVS-------STEHDKD-----KHRPDSLTPEISDGH 206

  Fly   254 SLSAGGGVS---------------------------------------GGCPPGIKRSAMDDPSG 279
            ...|...::                                       |..|..:||.|..:|.|
Zfish   207 KTRADDWLNKNKTVRELMTLNPYDGRFKKEHMHQRVMYETGPASKSDRGKHPKNLKRKASPEPDG 271

  Fly   280 VGGRPPLTRGESLPAAVSYVPERQLSGLRDKQQPVRAPSFDASTFKAANPIPNPIPHHLHIAEHM 344
            .|     |.|:.......::|.....||  |..||..|||                         
Zfish   272 EG-----TAGKINGDGQQWLPSASGDGL--KMPPVPPPSF------------------------- 304

  Fly   345 SPASRRNGSSPPSGPLP-PRSVHSPNSSGSSSGRRSSGSRHVSSTTVTSSEVGGSNPGQAVVAGG 408
                    :||||...| ||                                  :.|.:|     
Zfish   305 --------TSPPSTISPHPR----------------------------------TTPPEA----- 322

  Fly   409 LGGGGGGGPGSNAASGQLGGPSGGSGQLSCTSGGPGGSASSGSGGNGAIGPASMAPNSVAGDGSP 473
                                               |.:|::...|:..|....:|.::..|:.||
Zfish   323 -----------------------------------GAAAAATQNGHSPIAALILAADNAGGNSSP 352

  Fly   474 AGGNGPSGS--NGSGGSVNPGPGSSGSQGGGGGGTPLASGGGSAGSGGLGGAPGSSAASNSAAAA 536
            ...|....:  ..|...::|.......    |.|||...|..:.....:   |.||..|      
Zfish   353 KDANQVHSTTRRNSNSPLSPNQRRLAQ----GAGTPHVPGMDAVHPQSI---PDSSVPS------ 404

  Fly   537 AAAAAQNATLKCTLCQERLEDTHFVQCPSVNHHKFCFPCSRESIKRQNGLGNEVYCPSGDRCPLA 601
                  :..|.||||.||||||||||||||..|||||||||||||:|...| |||||||::|||.
Zfish   405 ------SIPLCCTLCHERLEDTHFVQCPSVPSHKFCFPCSRESIKQQGATG-EVYCPSGEKCPLV 462

  Fly   602 NSVIPWAFMQGEITTILGEEVKVKKERE 629
            .|.:|||||||||.|||..:|||||||:
Zfish   463 GSNVPWAFMQGEIATILAGDVKVKKERD 490

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PitsNP_001138192.1 IRF-2BP1_2 6..57 CDD:288155 40/50 (80%)
zf-C3HC4 548..593 CDD:278524 36/44 (82%)
irf2bp2aNP_956275.1 IRF-2BP1_2 10..61 CDD:288155 40/50 (80%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 60..213 46/215 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 245..330 30/198 (15%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 345..400 12/61 (20%)
Cys-rich 410..457 39/47 (83%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 97 1.000 Domainoid score I7163
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 269 1.000 Inparanoid score I2991
OMA 1 1.010 - - QHG46167
OrthoDB 1 1.010 - - D1156771at2759
OrthoFinder 1 1.000 - - FOG0001640
OrthoInspector 1 1.000 - - otm26217
orthoMCL 1 0.900 - - OOG6_110480
Panther 1 1.100 - - O PTHR10816
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1040
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1111.070

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