DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pits and Irf2bp1

DIOPT Version :9

Sequence 1:NP_001138192.1 Gene:Pits / 32205 FlyBaseID:FBgn0030400 Length:630 Species:Drosophila melanogaster
Sequence 2:NP_848872.2 Gene:Irf2bp1 / 272359 MGIID:2442159 Length:584 Species:Mus musculus


Alignment Length:730 Identity:219/730 - (30%)
Similarity:285/730 - (39%) Gaps:258/730 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 TKRQHCYLCDLPRMPWAMINDFSEAVCRGCVNYEGADRIEAVLDAARQMKRLH----------PA 59
            ::||.|||||||:|||||:.||||||||||||:|||||||.::|||||:||.|          ||
Mouse     7 SRRQWCYLCDLPKMPWAMVWDFSEAVCRGCVNFEGADRIELLIDAARQLKRSHVLPEGRSPGPPA 71

  Fly    60 SKQQRSHENGEVSAAAAAAVVLQQQQQLQVGPVPGQGPGSHRGGGGGGPPGAPPGSGGPGPSGAG 124
            .|...|.:.....:           |..|:.|...|...|..||...||                
Mouse    72 LKHPTSKDLASTGS-----------QGSQLPPPQAQAQPSGTGGSVSGP---------------- 109

  Fly   125 SLSSLGNAVAAAAAAAAVHHHHQMPYQMPVP----RIGPPLDYPVKLEDAPGGGVRPVRISHMTP 185
              .....|.:::..|            :|.|    .:|..|...:..|:|...|.|...:..: |
Mouse   110 --DRYDRATSSSRLA------------LPSPALEYTLGSRLANGLGREEAVAEGARRALLGSI-P 159

  Fly   186 HHLPPNATRGGGGAPGGGVPTAGSGGGSLPPALSVNLKRPP-SEDVDVDVSQQQQQSGHGLAPDG 249
            ..:||...         ....:|.||.:|..|..::..||. ..|.:   .::||::...||...
Mouse   160 SLMPPGLL---------AAAVSGLGGRALTLAPGLSPARPLFGSDFE---KEKQQRNADCLAELN 212

  Fly   250 SAGN------------------SLSA----------GGGVSG--------GCPPGIK---RSAMD 275
            .|..                  :|||          ..|:.|        ..|||.:   :...:
Mouse   213 EAMRGRAEEWHGRPKAVREQLLALSACAPFNVRFKKDHGLVGRVFAFDATARPPGYEFELKLFTE 277

  Fly   276 DPSGVGG-----------------RPPLTRGESLPAA----VSYVPE------RQL-----SGLR 308
            .|.|.|.                 |.|   |::|.::    :.|...      |||     .|:|
Mouse   278 YPCGSGNVYAGVLAVARQMFHDALREP---GKALASSGFKYLEYERRHGSGEWRQLGELLTDGVR 339

  Fly   309 DKQQPVRAPSFDASTFKAANPIPNPIPHHLHIAEHMSPASRRNGSSPPS------GPLPPRSVHS 367
            ..::|  ||         |..:|...|         .||.......||.      .|.|.|...|
Mouse   340 SFREP--AP---------AEALPQQYP---------EPAPAALCGPPPRAPSRNLAPTPRRRKAS 384

  Fly   368 PNSSGSSSGRRSS---GSRH-VSSTTVTSSEVGG-SNPGQAV--VAGGLG------GGGGGGPGS 419
            |...|.::|:.::   ..|| |:.....|||..| .:|..|:  ||..||      |||||    
Mouse   385 PEPEGETAGKMTTEEQQQRHWVAPGGPYSSETPGVPSPIAALKNVAEALGHSPKDPGGGGG---- 445

  Fly   420 NAASGQLGGPSGGSGQLSCTSGGPGGSASSGSGGNGAIGPASMAPNSVAGDGSPAGGNGPSGSNG 484
                             |..:||...:|||.:                    .|...:.....||
Mouse   446 -----------------SVRAGGASPAASSTT--------------------QPPAQHRLVARNG 473

  Fly   485 SGGSVNPGPGSSGSQGGGGGGTPLASGGGSAGSGGLGGAPGSSAASNSAAAAAAAAAQNATLKCT 549
            . ..|:|..|:....|||            :|:|...|||                     |.||
Mouse   474 E-AEVSPTAGAEAVSGGG------------SGTGATPGAP---------------------LCCT 504

  Fly   550 LCQERLEDTHFVQCPSVNHHKFCFPCSRESIKRQNGLGNEVYCPSGDRCPLANSVIPWAFMQGEI 614
            ||:||||||||||||||..||||||||||.||.| |...||||||||:|||..|.:|||||||||
Mouse   505 LCRERLEDTHFVQCPSVPGHKFCFPCSREFIKAQ-GPAGEVYCPSGDKCPLVGSSVPWAFMQGEI 568

  Fly   615 TTILGEEVKVKKERE 629
            .|||..::||||||:
Mouse   569 ATILAGDIKVKKERD 583

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PitsNP_001138192.1 IRF-2BP1_2 6..57 CDD:288155 40/50 (80%)
zf-C3HC4 548..593 CDD:278524 35/44 (80%)
Irf2bp1NP_848872.2 IRF-2BP1_2 8..59 CDD:288155 40/50 (80%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 59..120 15/89 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 346..421 22/92 (24%)
DUF2477 <348..>414 CDD:287586 16/74 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 433..495 23/115 (20%)
Cys-rich 503..550 38/47 (81%)
zf-C3HC4 503..547 CDD:278524 35/44 (80%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167848752
Domainoid 1 1.000 97 1.000 Domainoid score I7219
eggNOG 1 0.900 - - E1_KOG3579
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 283 1.000 Inparanoid score I2852
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG46167
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001640
OrthoInspector 1 1.000 - - otm43857
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10816
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1040
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1110.950

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