DRSC/TRiP Functional Genomics Resources

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Protein Alignment hwt and shdb

DIOPT Version :9

Sequence 1:NP_001259484.1 Gene:hwt / 32202 FlyBaseID:FBgn0264542 Length:1768 Species:Drosophila melanogaster
Sequence 2:XP_009294545.1 Gene:shdb / 564537 ZFINID:ZDB-GENE-030131-6059 Length:417 Species:Danio rerio


Alignment Length:461 Identity:122/461 - (26%)
Similarity:187/461 - (40%) Gaps:127/461 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly  1339 GSGGSGGSSVAY-----PLRPAPLLLH--SKLHILSPISDKSSQEPASASASEQSQQPSQQLAPM 1396
            |...:|.:.|::     |::.:.|.:.  |..|.|..:..:.........:|...::|:..:.|.
Zfish    53 GRNDNGSNEVSHTGFGSPMKSSSLDIKVVSPKHRLIKVDSQDLGRSKILLSSVSLEEPTDPVVPS 117

  Fly  1397 ASQEDDSTTSGAPAGNQVQVNASLKQPRSNRGAPNKALLQLADELLGSDSGISLHSREDGKPQAL 1461
            |....|:..|     :...|..   .||     |..|..|:..|             .:|..:..
Zfish   118 APVMGDTDYS-----DPFDVRL---DPR-----PESAQGQITPE-------------NNGYMEPY 156

  Fly  1462 ALQRLTLPKLQLIGAEGTTTSATASGAGGSSATGGSSGAGGSGSGSVVASGSTGIQQDLRDLPF- 1525
            ..|:: :.:||             ..|||        ||||.|.|.|          .|.|.|: 
Zfish   157 EAQKV-ITELQ-------------RRAGG--------GAGGWGRGEV----------QLYDTPYE 189

  Fly  1526 -------DMPKLRRRKTLQQE----------------AACTSGSATSVDLGELPFDMPKLRRRLR 1567
                   |:|:..|...|.|:                ...:...|...||.|||:..|       
Zfish   190 ERVPGQPDLPEEGRESRLPQDDDRPADEYDQPWEWKKEHISKAFADMKDLSELPWPPP------- 247

  Fly  1568 ANQAEINNLLMHSTESSGISQASSSHSMRDDQKMSSKLDTALFRQNLTLNLNESRQATKQFGSLD 1632
            ..|.|...:.....:..|...         |:..|.           |..|..|| |....||:.
Zfish   248 VGQLEEEPICGEQVQFEGAEW---------DRSCSP-----------TERLRCSR-APPTTGSMK 291

  Fly  1633 LRGLNSNKELNMNLSQGYVTAVDLIDVTIPLERQGWYHGAITRIEAETTLRPLSEGSFLVRNCES 1697
            ||          ..|..:....:.:|.::|||:|.||||:::|.|||:.|....|.|:||||.|:
Zfish   292 LR----------KPSDPHSMIGERVDPSLPLEKQVWYHGSLSRSEAESLLTLCKECSYLVRNSET 346

  Fly  1698 TKQDYSLSLKGAKGFMHMRIQRNETGQYILGQFSRPFETVPEMIRHFCLNRLPVRGAEHMCLIEP 1762
            ::.||||||:..:|||||:..:.:.|:|||||.|.||||:||:|.::..::||::||||:.|:.|
Zfish   347 SRLDYSLSLRSCQGFMHMKFSQCKDGRYILGQNSPPFETIPEVIHYYTTHKLPIKGAEHLSLLFP 411

  Fly  1763 VIAQLL 1768
            |:.|.|
Zfish   412 VLVQTL 417

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hwtNP_001259484.1 SH2_SHB_SHD_SHE_SHF_like 1666..1763 CDD:198198 49/96 (51%)
shdbXP_009294545.1 SH2_SHB_SHD_SHE_SHF_like 315..412 CDD:198198 49/96 (51%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 93 1.000 Domainoid score I7502
eggNOG 1 0.900 - - E1_28M87
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001120
OrthoInspector 1 1.000 - - otm25847
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR15127
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
76.870

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