DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment hwt and Shb

DIOPT Version :9

Sequence 1:NP_001259484.1 Gene:hwt / 32202 FlyBaseID:FBgn0264542 Length:1768 Species:Drosophila melanogaster
Sequence 2:NP_001028478.1 Gene:Shb / 230126 MGIID:98294 Length:503 Species:Mus musculus


Alignment Length:573 Identity:145/573 - (25%)
Similarity:227/573 - (39%) Gaps:175/573 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly  1268 GSRRNRHGQSQGQTTGGGHNYSSTESIATSSSGGSMESLRSSTSEGNRSTSSSESRH-------- 1324
            |.||.:..|:..|..........:.:...|:|.||:.....|||:..|:..:.:.|.        
Mouse    34 GERREQPPQAVPQACSASSASCGSAAACFSASSGSLPDDSGSTSDLIRAYRAQKERDFEDPYNGP 98

  Fly  1325 SSSLSS-----HSSESGSGGSGGSGGSSVAYPLRPAPLLLHSKLHILSPISDKSSQEPASASASE 1384
            .|||..     .....|.||.|..||...|:                          .|:|.|  
Mouse    99 GSSLRKLRAMCRLDYCGGGGGGDPGGGQRAF--------------------------TAAAGA-- 135

  Fly  1385 QSQQPSQQLAPMASQEDDSTTSG---APAGNQVQVNASLKQPRSNRGAPNKALLQLADELLGSDS 1446
                                 :|   |.||.....::|     |:.|:|:               
Mouse   136 ---------------------AGCCCAAAGAGAAASSS-----SSSGSPH--------------- 159

  Fly  1447 GISLHSREDGKPQALALQRLTLPKLQLIGAEGTTTSATASG-AGGSSATGGSSGA----GGSGSG 1506
              ...|..:.:|...|..|...||.:||..|    ||:|:| ..|...:||.:.:    ||....
Mouse   160 --LYRSSSERRPTTPAEVRYISPKHRLIKVE----SASAAGDPPGGVCSGGRTWSPTTCGGKKLL 218

  Fly  1507 SVVASGSTG--------IQQDLRDLPFDMPKLRRRKTLQQEAACTSGSATSVDLGELPFDMPKLR 1563
            :..::..||        |..|..| |||     .:..|:.:|    |...|....| |::..::.
Mouse   219 NKCSAEETGAGQKDKVTIADDYSD-PFD-----AKSDLKSKA----GKGESAGYME-PYEAQRIM 272

  Fly  1564 ---RRLRANQAEINNLLMHST--ESSGISQASSSHSM-----------RDDQKMSSKLDTALFRQ 1612
               :|..:.:::...:.::.|  |..|.|..|.|.|.           :||.:.:.:.|......
Mouse   273 TEFQRQESVRSQHKGIQLYDTPYEPEGQSVDSDSESTVSLRLRESKLPQDDDRPADEYDQPWEWN 337

  Fly  1613 NLTL-------NLNESRQATK--------------------QFGSLDLRGLNSNKELNMNLSQGY 1650
            .:|:       |.||.||::.                    :.||.:..|:...:          
Mouse   338 RVTIPALAAQFNGNEKRQSSPSPSRDRRRQLRAPGGGFKPIKHGSPEFCGILGER---------- 392

  Fly  1651 VTAVDLIDVTIPLERQGWYHGAITRIEAETTLRPLSEGSFLVRNCESTKQDYSLSLKGAKGFMHM 1715
                  :|.|||||:|.||||||:|.:||..||...|.|:||||.:::|.|||||||..:|||||
Mouse   393 ------VDPTIPLEKQIWYHGAISRSDAENLLRLCKECSYLVRNSQTSKHDYSLSLKSNQGFMHM 451

  Fly  1716 RIQRNETGQYILGQFSRPFETVPEMIRHFCLNRLPVRGAEHMCLIEPVIAQLL 1768
            ::.:.:. :|:|||.|.||::|||:|.::...:||::||||:.|:.||..:.|
Mouse   452 KLAKTKE-KYVLGQNSPPFDSVPEVIHYYTTRKLPIKGAEHLSLLYPVAVRTL 503

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hwtNP_001259484.1 SH2_SHB_SHD_SHE_SHF_like 1666..1763 CDD:198198 49/96 (51%)
ShbNP_001028478.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..49 5/14 (36%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 61..81 7/19 (37%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 147..180 8/54 (15%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 225..262 12/46 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 292..333 10/40 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 345..381 5/35 (14%)
SH2_SHB 402..498 CDD:198252 49/96 (51%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 97 1.000 Domainoid score I7222
eggNOG 1 0.900 - - E1_28M87
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001120
OrthoInspector 1 1.000 - - otm42570
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR15127
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
87.870

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