DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment hwt and She

DIOPT Version :9

Sequence 1:NP_001259484.1 Gene:hwt / 32202 FlyBaseID:FBgn0264542 Length:1768 Species:Drosophila melanogaster
Sequence 2:NP_766118.3 Gene:She / 214547 MGIID:1099462 Length:492 Species:Mus musculus


Alignment Length:612 Identity:133/612 - (21%)
Similarity:215/612 - (35%) Gaps:176/612 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly  1201 PPSTNSN---SNAASASASASVSATGS-AAPRRPRSFVLESGRVLELRRSAQGHQGGQSTHHHHH 1261
            ||:..:.   |.|:|...||:.:..|. .|.:..:.|.|......|  |:..|..||:       
Mouse     4 PPAPGAPRCLSWASSLFCSAASTLPGPLMAAKWFKEFPLTLKTASE--RARPGGAGGK------- 59

  Fly  1262 HHHHAPGSRRNRHGQSQGQTTGGGHNYSSTESIATSSSGG-------SMESL----RSSTSEGNR 1315
                   .|:|........|.|.|...|:.|..|:.:|.|       |.:||    :::..:|.:
Mouse    60 -------PRKNSETGGAAPTPGKGRKNSAAELGASKASSGPPKDSRLSRDSLQGLIQAAAGKGRK 117

  Fly  1316 -----STSSSESRH------SSSLSSHSS-------ESGSGGSGGSGGSSVAYPLRPAPLLLHSK 1362
                 :|::.|..|      |:..|::.|       :..:|.|...||.|               
Mouse   118 NSRVTATATEEEPHRGAVTKSAGCSTYISRLIKVDTQEKNGKSAYPGGGS--------------- 167

  Fly  1363 LHILSPISDKSSQEPASASASEQSQQPSQQLAPMASQEDD-------------STTSGAPAGNQV 1414
                   :..||...:|||:|..|..|....|.:..|:|.             ..|.|.....:|
Mouse   168 -------TSSSSSSSSSASSSPSSLGPELDKAKIMRQQDTVIILEDYADPYDAKRTKGQRDAERV 225

  Fly  1415 QVNASLKQPRSNRGAPNKALLQLADELLGSDSGISLHSREDGKPQALALQRLTLPKLQLIGAEGT 1479
            ..|....:|..            |.:::     ..:..|....|...|||.|..|     ...|.
Mouse   226 GENDGYMEPYD------------AQQMI-----TEIRRRGSKDPLVKALQLLDGP-----SEPGE 268

  Fly  1480 TTSATASGAGGSSATGGSSGAGGSGSGSVVASGSTGIQQDLRDLPFDMPKLRRRKTLQQEAACTS 1544
            |....|:....||                  ....|....|.|.|::..:..:|....:.....|
Mouse   269 TVKVEATAKRRSS------------------KDLLGKPPQLYDTPYEPSEGGQRVAEVKTRPADS 315

  Fly  1545 GSATSVDLGELPFDMP---KLRRRLRANQAEINNLLMHSTESSGISQASSSHSMRDDQKMSSKLD 1606
            ......|.....::.|   |..:..||...:...    |....|...|...|.            
Mouse   316 RLPEEDDRPAAEYEQPWEWKREQIARALSVQFEG----SDRPPGREDAGRPHH------------ 364

  Fly  1607 TALFRQNLTLNLNESRQATKQFGSLDLRGLNSNKELNMNLSQGYVTAVDLIDVTIPLERQGWYHG 1671
               :::.|...|::.....|                              :|..:.||:|.||||
Mouse   365 ---WQKTLKPTLSDHGDGEK------------------------------VDPGLALEKQPWYHG 396

  Fly  1672 AITRIEAETTLRPLSEGSFLVRNCESTKQDYSLSLKGAKGFMHMRIQRNETGQYILGQFSRPFET 1736
            :|:|.|||:.|:|..|.::||||.||....||::||.::|.:|:.:.:.:..:|.|.|.|..|::
Mouse   397 SISRAEAESRLQPCKEAAYLVRNSESGNSKYSIALKTSQGCVHIIVAQTKDNKYTLNQTSAVFDS 461

  Fly  1737 VPEMIRHFCLNRLPVRGAEHMCLIEPV 1763
            :||::.::...:||.:|||||.|:.||
Mouse   462 IPEVVHYYSNAKLPFKGAEHMTLLHPV 488

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hwtNP_001259484.1 SH2_SHB_SHD_SHE_SHF_like 1666..1763 CDD:198198 40/96 (42%)
SheNP_766118.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 46..193 38/184 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 214..236 5/21 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 260..332 14/94 (15%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 347..384 7/85 (8%)
SH2_SHE 391..488 CDD:198254 40/96 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_28M87
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001120
OrthoInspector 1 1.000 - - otm42570
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR15127
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
76.870

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