DRSC/TRiP Functional Genomics Resources

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Protein Alignment hwt and Shd

DIOPT Version :9

Sequence 1:NP_001259484.1 Gene:hwt / 32202 FlyBaseID:FBgn0264542 Length:1768 Species:Drosophila melanogaster
Sequence 2:NP_001152995.1 Gene:Shd / 20420 MGIID:1099461 Length:344 Species:Mus musculus


Alignment Length:265 Identity:82/265 - (30%)
Similarity:112/265 - (42%) Gaps:44/265 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly  1512 GSTGIQQDLRDL----PFDMPKLRRRKTLQQEAACTSGSATSVDLGELPFDMPKLRRRLRANQAE 1572
            ||.|.:|...:.    |||        ...|..|..||.....|...:..:.|.     ||.|..
Mouse    88 GSPGEEQPEAETEYSDPFD--------AQPQPPAPNSGYMEPYDARSVSSEQPS-----RAVQLY 139

  Fly  1573 INNLLMHSTE-SSGISQASSSHSMRD-------DQKMSSKLDTALFRQNLTLNLNESRQATKQFG 1629
            .......:|: ..|.|...|...:.|       ||....|.|            :.||....||.
Mouse   140 DTPYEEQATKPEDGGSSGQSRRPLEDERPADEYDQPWEWKKD------------HISRAFAVQFD 192

  Fly  1630 SLDL-RGLNSNKELNMNLSQGYVTAVDLIDVTIPLERQGWYHGAITRIEAETTLRPLSEGSFLVR 1693
            ..|. |...|.||      .......:.:|..:.||:|.|:||.::|.|||..|....|||:|||
Mouse   193 GPDWERTPCSTKE------PWRPQPAERVDTALALEKQPWFHGPLSRAEAENLLSLCKEGSYLVR 251

  Fly  1694 NCESTKQDYSLSLKGAKGFMHMRIQRNETGQYILGQFSRPFETVPEMIRHFCLNRLPVRGAEHMC 1758
            ..|:..||..|||:..:|.||::..|....|.:|||.|.||.::||::.|:....|||:||||:.
Mouse   252 LSETRAQDCILSLRSNQGSMHLKFARTRENQVVLGQHSGPFPSIPELVLHYSARPLPVQGAEHLA 316

  Fly  1759 LIEPV 1763
            |:.||
Mouse   317 LLYPV 321

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hwtNP_001259484.1 SH2_SHB_SHD_SHE_SHF_like 1666..1763 CDD:198198 43/96 (45%)
ShdNP_001152995.1 SH2_SHD 224..321 CDD:198253 43/96 (45%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 323..344
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 97 1.000 Domainoid score I7222
eggNOG 1 0.900 - - E1_28M87
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001120
OrthoInspector 1 1.000 - - otm42570
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR15127
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
87.870

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