DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lsp1alpha and Fbp1

DIOPT Version :9

Sequence 1:NP_511138.2 Gene:Lsp1alpha / 32199 FlyBaseID:FBgn0002562 Length:816 Species:Drosophila melanogaster
Sequence 2:NP_524065.1 Gene:Fbp1 / 39566 FlyBaseID:FBgn0000639 Length:1029 Species:Drosophila melanogaster


Alignment Length:1068 Identity:218/1068 - (20%)
Similarity:367/1068 - (34%) Gaps:342/1068 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 IAFLACVAVVTA----TAYHKTHDIKVADKAFLMKQKFLFEIVYRVEDPLMFEEYIAMGKQFYFD 65
            :||.|  .||.|    |...:...|.......|..|||:.:||..:..||...|.|.:......|
  Fly     8 VAFAA--GVVAAGRITTNQDRVQGIDRMSLEDLQLQKFILDIVQNIRQPLQQSELINLDVGLIAD 70

  Fly    66 KEHYT-HFDLYMEKFFEAHKAHALLPKGEFFGALVKHHAKQARGLFNFFYYAKDWETFMTNVAFA 129
            .:.|. ..|..|....:..:...||.:.:.:......|.:|.||::.....|:|::|...||.:.
  Fly    71 SQRYRGGIDKVMHNVIDLDRQRRLLDEHQVYSVGRLEHVQQLRGIYRLLARAQDFDTLRRNVVYL 135

  Fly   130 RMHFNEGMFVYALTLAVIHRDDFHGLVLPAIHEIFPQFFFNSKFVMEAEKFDYEMWMKTSLYEKE 194
            |.:.|..:.|.||.||:..|:|...|::||:.|:.|:.:.:.:.:.:......|...:.||    
  Fly   136 RRNINPVLLVNALALAIRDREDTQALIVPAVQELLPELYLDEEVIQQVRSVLREQTQRPSL---- 196

  Fly   195 YMDV--------------------YHKIPTFSSYEH-----GYKQGM--AYGYGKTHGHG-QTYE 231
             ||:                    .|........::     |.|:.:  |...|:..|.. .|.:
  Fly   197 -MDIVGMRQRAMNPVMSILMPWREIHMQMALRKQQNIQNVLGQKRVVVRAENQGQVEGTSLLTDD 260

  Fly   232 HEFGSMYQT---------------SDYMYMKDFKTWQWWKLMGLGEHWYSESNY----------- 270
            .|..:..|.               ...:...|.:..||   :|.....|.::|.           
  Fly   261 IELQNFVQNLIQELALLEDVTQLEQSQLINNDQREEQW---VGRQRVQYQDNNQERDLGQDVDTG 322

  Fly   271 -ILR---------------ENIYEYNQESNWLTMMK--------------DVK------------ 293
             :||               :|||. ||:..:..:::              |::            
  Fly   323 RLLRVSRRRLLEQQDEYQGQNIYG-NQKDRFQRLLRRDDDNDDNDDDDDQDIRMGRVQLQRGISQ 386

  Fly   294 -------KFYMP-VDYSRDLYLYNEESKLSYFTED------------LG---------------- 322
                   ...:| |..:.|..|:....:|:...:|            :|                
  Fly   387 GGLRIGGAHNLPTVSVNSDRLLHVSRRRLNAIQQDQQQDQLNGRQRFMGLVRGDRLSEGRRVGQL 451

  Fly   323 ----------WNSYWYYLNMDYSFFLDGKTFGL-------------------------------- 345
                      |....|.|.       .|:|||:                                
  Fly   452 DDVRQERQNNWQKQDYILT-------QGRTFGVQQERQNYADQLESVSRDDERLVHINRRRLNQD 509

  Fly   346 ----------------------------------------------------------------- 345
                                                                             
  Fly   510 NQDIQQQQMHFPRRINSIGEGRRVMGERPIQDEDILKLIRGENRLKLMTDDEILEMLQRNRQQRL 574

  Fly   346 -----------------------------------QNDRRGEWWLYNVHQLLSRYHMERLSHG-L 374
                                               ||:|..|..|:|:.||::|.:.|.::.| |
  Fly   575 QKHQNDDDDDVNDDDVNVVHRQGLRSRRSLPNLRQQNNRLSEIVLHNLRQLVARLNQESIAQGQL 639

  Fly   375 GEIPQFSWFHQIEMGYDPQLIYYNGIGYSYRKNYYELETYGNFEMLDKITGFQQRIQNIVELGYY 439
            .|       .|.::..:|:|.  ....|:.|.|...:.:..:.::|.:|...:||||.::.....
  Fly   640 IE-------EQQQLINNPRLT--QSERYALRLNQIRINSQRSRQVLAQIGQIEQRIQEVIGQVLN 695

  Fly   440 Q----TTDGHMIDLRKPESIEIIGNMLQGNVDAIDNIFFQFWYMLAHMYFADTHYYQMEVYPNVM 500
            |    :..|.:||.|:.||  :|.::|.|.:..:..:      .:......|.:..|::     .
  Fly   696 QVNVNSLRGQVIDQRQVES--LIADVLLGRLGQVGIM------TIIRQVVQDNNIEQID-----R 747

  Fly   501 LNFETMMRDPMF-YMFYKSIAQVYFQFMHHLPKYTKEQLLMPGVTLKHVEVSELVTYFDLVDFDV 564
            ......:.||:. |...:.:..|..|....|..|.:|||.|.||::..|.|.:|.|..:..:.|:
  Fly   748 TGLGIRLSDPVVQYTLRRIVRIVDEQREQILGGYRQEQLQMRGVSINDVRVDKLRTRIEEHELDL 812

  Fly   565 TNMLNGKMVFHEGQFLWDKSLFARQMRLNHKPFSYTYTIDSARDEKVVIRAFLGPKFDEYGRM-I 628
            :|::..::   :|   ..:.:..||.|||:|.|:....|.|.:|:..:||.||||..|:.||. .
  Fly   813 SNLVEQQV---QG---IQQEIVGRQRRLNNKAFTIDMDITSDQDQDAIIRIFLGPAEDQQGRQGA 871

  Fly   629 SLTDNRMNFMEIDEFTYTLKTGSNLITRKSTDFAWTVKDRTTYTELYYYTMMAFDGKYDYPL--- 690
            ||.:.|.:|:.:|.....|:.|.|.|.|:|.|..||..|.|...|:|...|:...|:....:   
  Fly   872 SLDERRRDFVLLDAIQVQLENGRNRIHRRSIDIPWTTSDVTPLVEIYRQVMLQLKGQQAQQVVGI 936

  Fly   691 -DLTEPHCGFPDRLVLPMGWKKGMPMQMFFMVVPYMAPQHEQFSTFDYTYSCGIGSGARHVDSLP 754
             .|...:..||..|:||.|..:|:|||:..:|.|.:..|.:....   ..:.||||.:.. |:.|
  Fly   937 QQLVGENGRFPQHLLLPRGRPEGLPMQLLVVVSPLVELQVQDVVP---AITIGIGSASLR-DARP 997

  Fly   755 FGYPFDREI-NEYE-FHVPNMYFKDVTI 780
            .|||.||.| ||.| ..:.|:..:||.|
  Fly   998 LGYPLDRPIHNEQELLQLTNVLLQDVVI 1025

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lsp1alphaNP_511138.2 Hemocyanin_N 32..154 CDD:281684 34/122 (28%)
Hemocyanin_M 287..523 CDD:278784 55/445 (12%)
Hemocyanin_C 532..782 CDD:281685 86/256 (34%)
Fbp1NP_524065.1 Hemocyanin_N 38..159 CDD:281684 34/120 (28%)
Hemocyanin_C 781..1025 CDD:281685 85/253 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45470652
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_28IXN
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11511
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

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