DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Lsp1alpha and CG8100

DIOPT Version :9

Sequence 1:NP_511138.2 Gene:Lsp1alpha / 32199 FlyBaseID:FBgn0002562 Length:816 Species:Drosophila melanogaster
Sequence 2:NP_001261825.1 Gene:CG8100 / 39565 FlyBaseID:FBgn0036410 Length:648 Species:Drosophila melanogaster


Alignment Length:742 Identity:169/742 - (22%)
Similarity:282/742 - (38%) Gaps:231/742 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 KQKFLFEIVYRVEDPLMFEEYIAMGKQFYFDKEHYTHFD-LYMEKFFEAHKAHALLPKGEF--FG 96
            :|.||..::.:|..||:.||.|.||.|...|.:.|.... .|::.|.|  :.|.....|.|  ..
  Fly    43 RQYFLLNLLIQVHKPLLHEELITMGSQLNDDPDSYKEGTWRYIKDFRE--RVHQNRVPGPFVILN 105

  Fly    97 ALVKHHAKQARGLFNFFYYAKDWETFMTNVAFARMHFNEGMFVYALTLAVIHRDDFHGLVLPAIH 161
            .|.:.......|::.|...|.||.:|..|..|||:||:..:||.||.:||..|:|...|.:||::
  Fly   106 QLDEEMPLNLLGIYRFLTMAVDWTSFQRNACFARIHFHPLLFVNALQMAVEEREDTKDLRMPAMY 170

  Fly   162 EIFPQFFFNSKFVMEAEKFDYEMWMKTSLY--EKEYMDVYHKIPTFSSYEHGYKQGMAYGYGKTH 224
            |:.||.:|..:.::.|::..:.......|.  ::.::|:.          .||:           
  Fly   171 EVLPQLYFEKEVILTAQEVTWNQLSPIRLVTPKRRWIDIL----------LGYR----------- 214

  Fly   225 GHGQTYEHEFGSMYQTSDYMYMKDFKTWQWWKLMGLGEHWYSESNYILRENIYEYNQESNWLTMM 289
                                                                   |.:..|:   
  Fly   215 -------------------------------------------------------NPKQPWM--- 221

  Fly   290 KDVKKFYMPVDYSRDLYLYNEESKLSYFTEDLGWNSYWYYL-------------NMDYSFFLDGK 341
               ::..:|.|   .|.:.|.. |::|.:.||..||:|..|             ..:....:|| 
  Fly   222 ---EEEPIPTD---PLIIDNAR-KVAYLSLDLELNSHWNSLITRLIISIEEGKEKTNEPIIIDG- 278

  Fly   342 TFGLQNDR----RGEW--------------------WLYNVHQLLSRYHMERLSHGLGEIPQFSW 382
                  ||    ||.:                    :|||:||.::...||.|:.|.        
  Fly   279 ------DRLVAFRGSFDEVNFKKHLALGSHFHNTKLYLYNLHQFVAALSMEDLATGQ-------- 329

  Fly   383 FHQIEMGYDPQLIYYNGIGYSYRKNYYELETYGNFEMLDKITGFQQRIQNIVELGYYQTTDGHMI 447
             ...|:.| |.|:...|:.|.        .|..|.|          .::.|::|    |.||   
  Fly   330 -KSTELIY-PPLMTTGGVPYK--------GTSLNIE----------AVRGIIDL----TIDG--- 367

  Fly   448 DLRKPESIEIIGNMLQGNVDAIDNIFFQFWYMLAHMYFADTHYYQMEV------YPNVMLNFETM 506
               ..:.||:   .::.|..|:||:... ..::.:.|........:.|      .|:::.:..:.
  Fly   368 ---LKDKIEM---AVKHNNHAMDNLSIA-GGIIGNNYLHICRQLNLAVNGQGINQPSMLGSATSN 425

  Fly   507 MRDPMFYMFYKSIAQVYFQFMHHLPKYTKEQLLMPGV------TLKHVEVSELVTYFDLVDFDVT 565
            :|||:    |:|:   .|:....|..|..|. :.|.|      .:..::||.|||:.:.:..|:.
  Fly   426 LRDPI----YRSL---LFRIYDLLKSYENEN-IFPDVGGRETPKIVDIQVSRLVTFEETMTTDLI 482

  Fly   566 NMLNGKMVF-HEG--QFLWDKSLFARQMRLNHKPFSYTYTIDSARDEKVVIRAFLGPKFDEYGRM 627
            |:::.:::. |..  ||| .::|.|||.||||.|||  ..:|....|.:|:.|          ||
  Fly   483 NLIDQQLLLSHRNNLQFL-RRNLVARQHRLNHDPFS--IGLDIVAPENLVVEA----------RM 534

  Fly   628 ISLTDNRMNF-MEIDEFTYTLKTGSNLITRKSTDFAWTVKDRTTYTELYYYTMMAFDGKYDY-PL 690
            .....|::.. :.:|.|..:||.|.|...|:..    |...:.|.:|||         :.|| ..
  Fly   535 YLSLPNQLRLRLHLDSFKCSLKRGLNHFERQFP----TAISKPTLSELY---------EADYAST 586

  Fly   691 DLTEPHCGFPDRLVLPMGWKKGMPMQM 717
            |:|..: .||..|.||.|...|:.:|:
  Fly   587 DVTTSN-RFPPHLQLPRGTGDGLKLQL 612

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lsp1alphaNP_511138.2 Hemocyanin_N 32..154 CDD:281684 41/121 (34%)
Hemocyanin_M 287..523 CDD:278784 55/278 (20%)
Hemocyanin_C 532..782 CDD:281685 57/197 (29%)
CG8100NP_001261825.1 Hemocyanin_N 41..163 CDD:281684 41/121 (34%)
Hemocyanin_C 444..>621 CDD:281685 57/197 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45470648
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_28IXN
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0012705
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11511
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.840

Return to query results.
Submit another query.