DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lsp1alpha and PPO2

DIOPT Version :9

Sequence 1:NP_511138.2 Gene:Lsp1alpha / 32199 FlyBaseID:FBgn0002562 Length:816 Species:Drosophila melanogaster
Sequence 2:NP_610443.1 Gene:PPO2 / 35910 FlyBaseID:FBgn0033367 Length:684 Species:Drosophila melanogaster


Alignment Length:741 Identity:170/741 - (22%)
Similarity:290/741 - (39%) Gaps:187/741 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    89 LPKGEFFGALVKHHAKQARGLFNFFYYAKDWETFMTNVAFARMHFNEGMFVYALTLAVIHRDDFH 153
            |.:.|.|...:..|.:.|..|.:.|...:..:...:...:||...|..:|.|||::|::||.|..
  Fly    75 LGRDEQFSLFLPKHRRIAGRLIDIFMNMRSVDDLQSVAVYARDRVNPVLFNYALSVALLHRPDTQ 139

  Fly   154 GLVLPAIHEIFPQFFFNSKFVMEAEKFDYEMWMKTSLYEKEYMDVYHKIPTFSSYEHGYKQGMAY 218
            ||.||:..:.||..|.:|:.:.:                                          
  Fly   140 GLDLPSFSQTFPDRFIDSQVIRK------------------------------------------ 162

  Fly   219 GYGKTHGHGQTYEHEFGSMYQTSDYMYMKDFKTWQWWKLMGLGEHWYSESNYILRENIYEYNQES 283
                                                                 :||..:.....|
  Fly   163 -----------------------------------------------------MREESFVVQPGS 174

  Fly   284 NWLTMMKDVKKFYMPVDYSRDLYLYNE---ESKLSYFTEDLGWNSYWYYLNMDYSFFLDGKTFGL 345
            .            ||:...|| |..::   |.:|.||.||||.|.:.::.::.|.|....::. :
  Fly   175 R------------MPITIPRD-YTASDLDPEHRLWYFREDLGINLHHWHWHLVYPFEASDRSI-V 225

  Fly   346 QNDRRGEWWLYNVHQLLSRYHMERLSHGLGEIPQFSWFHQ-IEMGYDPQL-IYYNGIGYSYRKNY 408
            ..|||||.:.|...|:::||:.||.|:.|..:..|:.... |..||.|:: .......:..|...
  Fly   226 AKDRRGELFYYMHQQVIARYNAERFSNNLARVLPFNNLRDPIAEGYFPKMDSLVASRAWPPRFES 290

  Fly   409 YELETYG------NFEMLDKITGFQQRIQNIVELGYYQTTDGHMIDLRKPESIEIIGNMLQGNVD 467
            ..|....      |.|:.| :..::.||...:..|:.....|:.:.|.:...|:.:|||::.::.
  Fly   291 TRLSDLNRESDQLNVEIGD-LERWRDRIYEAIHQGFVMDERGNRVPLDEATGIDTLGNMIESSIL 354

  Fly   468 AIDNIFFQFWYMLAHMYFADTH---YYQMEVYPNVMLNFETMMRDPMFYMFYKSIAQVYFQFMHH 529
            :.:.:.:...:...|.:.:..|   ...:|.: .||.:..|.||||:||.::..|.:::.:....
  Fly   355 SPNRVLYGDLHNNGHTFISYAHDPTSKHLESF-GVMGDVSTAMRDPVFYKWHSYIDRIFQEHKSR 418

  Fly   530 LPKYTKEQLLMPGVTLKHVEV-------SELVTYFDLVDFDVTNMLNGKMVFHEGQFLWDKSLFA 587
            ||.||:.||..|||::..::|       :.|.|::...|.|::...:         ||...::||
  Fly   419 LPAYTENQLNYPGVSIAGIQVDTNGGRPNNLTTFWQQSDVDMSRGFD---------FLPRGNVFA 474

  Fly   588 RQMRLNHKPFSYTYTI--DSARDEKVVIRAFLGPKFDEYGRMISLTDNRMNFMEIDEFTYTLKTG 650
            |...|.|.||:||.::  ||.......:|.|:.||.||.|:.:.:.|.|...:|:|:|..:|..|
  Fly   475 RFTHLQHLPFTYTISLNNDSGAQRFGYVRIFMAPKNDERGQPMLMRDQRSMMIELDKFVTSLNPG 539

  Fly   651 SNLITRKSTDFAWTVKDRTTYTELYYYTMMAFDGKYDYPLDLTEP-------------HCGFPDR 702
            .|.|.|:||:.:.|:....|:..                ||...|             .||:|:.
  Fly   540 PNTIRRRSTESSVTIPFERTFRN----------------LDANRPAAGTPEELEFNFCGCGWPNH 588

  Fly   703 LVLPMGWKKGMPMQMFFMVVPYMAPQHEQ---FSTFDYTYSCGIGSGARHVDSLPFGYPF----- 759
            :::|.|..:|:...:|.||..|...:.:|   ....|....||: ....:.|....|:||     
  Fly   589 MLVPKGLPEGLQCVLFIMVSNYENDRIDQQLVGRCSDAASYCGV-RDRLYPDRQSMGFPFDRLPR 652

  Fly   760 ---DREINEYEFHVPNMYFKDVTIYH 782
               ||.:|   |..|||...||.|.|
  Fly   653 SGVDRLVN---FLTPNMSIVDVNIRH 675

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lsp1alphaNP_511138.2 Hemocyanin_N 32..154 CDD:281684 18/64 (28%)
Hemocyanin_M 287..523 CDD:278784 61/249 (24%)
Hemocyanin_C 532..782 CDD:281685 77/282 (27%)
PPO2NP_610443.1 Hemocyanin_N 19..140 CDD:281684 18/64 (28%)
Hemocyanin_M 150..412 CDD:278784 68/372 (18%)
Hemocyanin_C 421..675 CDD:281685 77/282 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45470664
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11511
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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