DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lsp1alpha and Lsp1beta

DIOPT Version :9

Sequence 1:NP_511138.2 Gene:Lsp1alpha / 32199 FlyBaseID:FBgn0002562 Length:816 Species:Drosophila melanogaster
Sequence 2:NP_001285556.1 Gene:Lsp1beta / 33274 FlyBaseID:FBgn0002563 Length:789 Species:Drosophila melanogaster


Alignment Length:815 Identity:647/815 - (79%)
Similarity:735/815 - (90%) Gaps:27/815 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKFAIAFLACVAVVTATAYHKTHDIKVADKAFLMKQKFLFEIVYRVEDPLMFEEYIAMGKQFYFD 65
            ||.|||.|||:.:..|.::|:||::|:||||||||||||||||||||||||||::|..|::|||:
  Fly     1 MKIAIALLACLGLAAAASFHQTHEVKIADKAFLMKQKFLFEIVYRVEDPLMFEDHIKQGEKFYFE 65

  Fly    66 KEHYTHFDLYMEKFFEAHKAHALLPKGEFFGALVKHHAKQARGLFNFFYYAKDWETFMTNVAFAR 130
            :.:|||:|:||:|||||:||||||||||||||||..|||||||||||||||||||||..|||:||
  Fly    66 ESYYTHYDMYMKKFFEAYKAHALLPKGEFFGALVMSHAKQARGLFNFFYYAKDWETFAANVAWAR 130

  Fly   131 MHFNEGMFVYALTLAVIHRDDFHGLVLPAIHEIFPQFFFNSKFVMEAEKFDYEMWMKTSLYEKEY 195
            ||.||||||||||:|||||:|||||:||:|:|||||||||||||.||||||||||||.::|||||
  Fly   131 MHVNEGMFVYALTMAVIHRNDFHGLMLPSIYEIFPQFFFNSKFVFEAEKFDYEMWMKMTMYEKEY 195

  Fly   196 MDVYHKIPTFSSYEHGYKQGMAYGYGKTHGHGQTYEHEFGSMYQTSDYMYMKDFKTWQWWKLMGL 260
            ||||:                     ||:|      :::.:||::|||.||||||||||||||||
  Fly   196 MDVYY---------------------KTNG------YDYSTMYRSSDYTYMKDFKTWQWWKLMGL 233

  Fly   261 GEHWYSESNYILRENIYEYNQESNWLTMMKDVKKFYMPVDYSRDLYLYNEESKLSYFTEDLGWNS 325
            |||||:|..:||||||||:|||:.||:||||||||||||||:|||.|||:||||||||||||||:
  Fly   234 GEHWYTEDKFILRENIYEFNQETKWLSMMKDVKKFYMPVDYTRDLNLYNKESKLSYFTEDLGWNA 298

  Fly   326 YWYYLNMDYSFFLDGKTFGLQNDRRGEWWLYNVHQLLSRYHMERLSHGLGEIPQFSWFHQIEMGY 390
            |||||||||||||||.||.|:|||||||||||||||||||:|||||||.||||:|||:.||||||
  Fly   299 YWYYLNMDYSFFLDGNTFDLKNDRRGEWWLYNVHQLLSRYYMERLSHGFGEIPEFSWYQQIEMGY 363

  Fly   391 DPQLIYYNGIGYSYRKNYYELETYGNFEMLDKITGFQQRIQNIVELGYYQTTDGHMIDLRKPESI 455
            |||||||||||||:||||||:|||.|::||||||||.:||.||||:|||:|.|||.|||||||:|
  Fly   364 DPQLIYYNGIGYSFRKNYYEMETYANYDMLDKITGFLKRIHNIVEMGYYKTADGHTIDLRKPEAI 428

  Fly   456 EIIGNMLQGNVDAIDNIFFQFWYMLAHMYFADTHYYQMEVYPNVMLNFETMMRDPMFYMFYKSIA 520
            |.|||||||||||:|.:|:|||||||||||||..||||:|||||||||||||||||:||||||||
  Fly   429 EFIGNMLQGNVDAMDKMFYQFWYMLAHMYFADADYYQMDVYPNVMLNFETMMRDPMYYMFYKSIA 493

  Fly   521 QVYFQFMHHLPKYTKEQLLMPGVTLKHVEVSELVTYFDLVDFDVTNMLNGKMVFHEGQFLWDKSL 585
            ||||||||:|||||||||||||||:|:||||:|.|||||||||||||||.||:|.:|:|:||.||
  Fly   494 QVYFQFMHYLPKYTKEQLLMPGVTMKNVEVSDLTTYFDLVDFDVTNMLNDKMIFQDGKFVWDMSL 558

  Fly   586 FARQMRLNHKPFSYTYTIDSARDEKVVIRAFLGPKFDEYGRMISLTDNRMNFMEIDEFTYTLKTG 650
            ||||||||||||:|||||:|.:.|||||||||||||||:|::|||.:|||||||||||.|.||.|
  Fly   559 FARQMRLNHKPFTYTYTIESEKVEKVVIRAFLGPKFDEFGKVISLAENRMNFMEIDEFYYELKAG 623

  Fly   651 SNLITRKSTDFAWTVKDRTTYTELYYYTMMAFDGKYDYPLDLTEPHCGFPDRLVLPMGWKKGMPM 715
            :|.|||||::|.|||||||||||||||||||||||||:|||::||||||||||||||||:|||||
  Fly   624 TNKITRKSSEFYWTVKDRTTYTELYYYTMMAFDGKYDFPLDISEPHCGFPDRLVLPMGWQKGMPM 688

  Fly   716 QMFFMVVPYMAPQHEQFSTFDYTYSCGIGSGARHVDSLPFGYPFDREINEYEFHVPNMYFKDVTI 780
            |||||||||:||.||||||||||||||||||||:||||||||||||.|:||||.|||||||||:|
  Fly   689 QMFFMVVPYVAPAHEQFSTFDYTYSCGIGSGARYVDSLPFGYPFDRAIDEYEFFVPNMYFKDVSI 753

  Fly   781 YHADTMEKYYNYKEYTNYGHFDYSFFNDYYTKYFK 815
            |||||||.||.||.|:|||||||:|||||||||||
  Fly   754 YHADTMEPYYKYKSYSNYGHFDYTFFNDYYTKYFK 788

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lsp1alphaNP_511138.2 Hemocyanin_N 32..154 CDD:281684 99/121 (82%)
Hemocyanin_M 287..523 CDD:278784 200/235 (85%)
Hemocyanin_C 532..782 CDD:281685 209/249 (84%)
Lsp1betaNP_001285556.1 Hemocyanin_N 32..154 CDD:281684 99/121 (82%)
Hemocyanin_M 161..496 CDD:278784 277/361 (77%)
Hemocyanin_C 505..755 CDD:281685 209/249 (84%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45470632
Domainoid 1 1.000 105 1.000 Domainoid score I12745
eggNOG 1 0.900 - - E1_28IXN
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 554 1.000 Inparanoid score I2689
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG27073
OrthoDB 1 1.010 - - D130404at33208
OrthoFinder 1 1.000 - - FOG0012705
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11511
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X3797
109.910

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