DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cpr11A and Lcp1

DIOPT Version :9

Sequence 1:NP_572803.1 Gene:Cpr11A / 32198 FlyBaseID:FBgn0030394 Length:270 Species:Drosophila melanogaster
Sequence 2:NP_001260801.1 Gene:Lcp1 / 35817 FlyBaseID:FBgn0002531 Length:130 Species:Drosophila melanogaster


Alignment Length:145 Identity:34/145 - (23%)
Similarity:57/145 - (39%) Gaps:38/145 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKSFLILLGFAALAAAD--VKHLTDRNLDLFKYNPSDIYTLPEDIDDDKPAVHFSGDVMKAKTET 63
            |..|:::.....||.|:  |.|...|:.|:.    :|:.:..:|:..|                 
  Fly     1 MFKFVMICAVLGLAVANPPVPHSLGRSEDVH----ADVLSQSDDVRAD----------------- 44

  Fly    64 LQNYNSGKKFKLELKTQNGIEVSSVGKLKDDKTFVVSGSYSFTGADGKRYKTRYTADEFGYHPIT 128
                    .|...|.|.||||.::.|    |....:.|::.:...:|:..:.:|.|:|.||.|..
  Fly    45 --------GFDSSLHTSNGIEQAASG----DAHGNIHGNFGWISPEGEHVEVKYVANENGYQPSG 97

  Fly   129 ELDLDIPEPQPLASA 143
            ..   ||.|.|:..|
  Fly    98 AW---IPTPPPIPEA 109

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cpr11ANP_572803.1 Chitin_bind_4 73..124 CDD:278791 14/50 (28%)
Lcp1NP_001260801.1 Chitin_bind_4 46..93 CDD:278791 14/50 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10380
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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