DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rab40 and CRACR2A

DIOPT Version :10

Sequence 1:NP_727611.1 Gene:Rab40 / 32195 FlyBaseID:FBgn0030391 Length:265 Species:Drosophila melanogaster
Sequence 2:XP_006719084.1 Gene:CRACR2A / 84766 HGNCID:28657 Length:732 Species:Homo sapiens


Alignment Length:171 Identity:64/171 - (37%)
Similarity:93/171 - (54%) Gaps:11/171 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 DYLLKVLLVGDSDVGKHEILSNLEDPSTESPFCSGNDCTSHILQTVAYKTTTILLEGKRVKLQLW 73
            |.|.|::.||:|.|||...|...    .|..|..|...|..|    .|:..|:.::..:|.||||
Human   544 DRLFKIVFVGNSAVGKTSFLRRF----CEDRFSPGMAATVGI----DYRVKTLNVDNSQVALQLW 600

  Fly    74 DTSGQGRFCTIIRSYSRGAQGIILVYDITNKWSFDGIDRWLKEVDEHAPG--IPKVLVGNRLHLA 136
            ||:||.|:..|.:.:.|.|.|:|::||:|:|.||..:.|||..|:| |.|  :|.:|:||:|...
Human   601 DTAGQERYRCITQQFFRKADGVIVMYDLTDKQSFLSVRRWLSSVEE-AVGDRVPVLLLGNKLDNE 664

  Fly   137 FKRQVAAKQAETYASRNNMSCFEISPLCNFNIRESFCELAR 177
            .:|:|.....|..|:.||:..:|.|.....|.:||...|||
Human   665 KEREVPRGLGEQLATENNLIFYECSAYSGHNTKESLLHLAR 705

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab40NP_727611.1 P-loop containing Nucleoside Triphosphate Hydrolases 6..265 CDD:476819 64/171 (37%)
SOCS 192..234 CDD:470605
CRACR2AXP_006719084.1 FRQ1 <35..118 CDD:444056
SMC_prok_B <201..>384 CDD:274008
Rab 547..705 CDD:206640 60/166 (36%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.