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Protein Alignment Rab40 and RABE1c
DIOPT Version :9
Sequence 1: | NP_727611.1 |
Gene: | Rab40 / 32195 |
FlyBaseID: | FBgn0030391 |
Length: | 265 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001078248.1 |
Gene: | RABE1c / 823749 |
AraportID: | AT3G46060 |
Length: | 216 |
Species: | Arabidopsis thaliana |
Alignment Length: | 174 |
Identity: | 73/174 - (41%) |
Similarity: | 104/174 - (59%) |
Gaps: | 12/174 - (6%) |
- Green bases have known domain annotations that are detailed below.
Fly 7 DYDYLLKVLLVGDSDVGKHEILSNLEDPSTESPFCSGNDCTSHILQT-VAYKTTTILLEGKRVKL 70
|||||:|:||:|||.|||..:|....| |:..||.|... :.:|..||.|:|||:||
plant 11 DYDYLIKLLLIGDSGVGKSCLLLRFSD---------GSFTTSFITTIGIDFKIRTIELDGKRIKL 66
Fly 71 QLWDTSGQGRFCTIIRSYSRGAQGIILVYDITNKWSFDGIDRWLKEVDEHA-PGIPKVLVGNRLH 134
|:|||:||.||.||..:|.|||.||:||||:|::.||:.|..|::.:::|| ..:.|:||||:..
plant 67 QIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
Fly 135 L-AFKRQVAAKQAETYASRNNMSCFEISPLCNFNIRESFCELAR 177
: ..||.|...:.:..|....:..||.|...|.|:.|.|..:.|
plant 132 MDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEEVFFSIGR 175
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_KOG0078 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
1 |
1.100 |
- |
- |
O |
PTHR47980 |
Phylome |
1 |
0.910 |
- |
- |
|
|
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
3 | 2.910 |
|
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