Protein Alignment Rab40 and rab40b

DIOPT Version :9

• Sequence 1: NP_727611.1
• Gene: Rab40 / 32195
• FlyBaseID: FBgn0030391
• Length: 265
• Species: Drosophila melanogaster
• Sequence 2: NP_001072188.1
• Gene: rab40b / 779634
• XenbaseID: XB-GENE-490554
• Length: 278
• Species: Xenopus tropicalis
• Alignment Length: 278
• Identity: 166/278 - (59%)
• Similarity: 205/278 - (73%)
• Gaps: 26/278 - (9%)

  Fly     6 KDYDYLLKVLLVGDSDVGKHEILSNLEDPSTESPFCSGNDCTSHILQTVAYKTTTILLEGKRVKL 70
            |.||:|||.||||||||||.|||::|:|..||||:  |.:      ..:.||||||||:|:|:||
 Frog     9 KAYDFLLKFLLVGDSDVGKGEILASLQDGCTESPY--GYN------MGIDYKTTTILLDGRRIKL 65

  Fly    71 QLWDTSGQGRFCTIIRSYSRGAQGIILVYDITNKWSFDGIDRWLKEVDEHAPGIPKVLVGNRLHL 135
            ||||||||||||||.|||||||||:||||||||:|||||||||:||:||||||:||:||||||||
 Frog    66 QLWDTSGQGRFCTIFRSYSRGAQGVILVYDITNRWSFDGIDRWIKEIDEHAPGVPKILVGNRLHL 130

  Fly   136 AFKRQVAAKQAETYASRNNMSCFEISPLCNFNIRESFCELARMALHRNGMEHIWRSNKVLSLQEL 200
            ||||||:..||:.:|.|..|:.||:||||||||.|||.||||:.|.|:||:.:||.|||||||:|
 Frog   131 AFKRQVSTDQAQNFAERLGMTFFEVSPLCNFNITESFTELARIVLMRHGMDRLWRPNKVLSLQDL 195

  Fly   201 CCRTIVRRTSVYAIDSLPLPPSVKSTLK----------------SYALTTSQC--FNSLTQSSKS 247
            |||.||..|.|:.:|.||||.:::|.||                ||:||.:..  .|||.::...
 Frog   196 CCRAIVSCTPVHLVDKLPLPVALRSHLKSFSMANGLNARMMHGRSYSLTANNANKRNSLKKAKII 260

  Fly   248 KNRCKTPTSSSRNSCAIA 265
            :.....|.:.:||||.|:
 Frog   261 RPPQSPPKNCTRNSCKIS 278

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab40	NP_727611.1	P-loop_NTPase	6..265	CDD:304359	165/276 (60%)
		RAB	12..182	CDD:197555	121/169 (72%)
		SOCS	192..234	CDD:295349	26/57 (46%)
rab40b	NP_001072188.1	Rab40	9..278	CDD:133321	165/276 (60%)
		SOCS_Rab40	187..229	CDD:239711	23/41 (56%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	248	1.000	Domainoid score	I2097
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	327	1.000	Inparanoid score	I2428
OMA	1	1.010	-	-		QHG46774
OrthoDB	1	1.010	-	-		D1065856at2759
OrthoFinder	1	1.000	-	-		FOG0002583
OrthoInspector	1	1.000	-	-		otm49502
Panther	1	1.100	-	-	O	PTHR47980
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X1940
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	11	11.080