Sequence 1: | NP_727611.1 | Gene: | Rab40 / 32195 | FlyBaseID: | FBgn0030391 | Length: | 265 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001035438.1 | Gene: | rab40c / 678600 | ZFINID: | ZDB-GENE-030515-1 | Length: | 279 | Species: | Danio rerio |
Alignment Length: | 285 | Identity: | 165/285 - (57%) |
---|---|---|---|
Similarity: | 202/285 - (70%) | Gaps: | 31/285 - (10%) |
- Green bases have known domain annotations that are detailed below.
Fly 2 GTMTKDYDYLLKVLLVGDSDVGKHEILSNLEDPSTESPFC--SGNDCTSHILQTVAYKTTTILLE 64
Fly 65 GKRVKLQLWDTSGQGRFCTIIRSYSRGAQGIILVYDITNKWSFDGIDRWLKEVDEHAPGIPKVLV 129
Fly 130 GNRLHLAFKRQVAAKQAETYASRNNMSCFEISPLCNFNIRESFCELARMALHRNGMEHIWRSNKV 194
Fly 195 LSLQELCCRTIVRRTSVYAIDSLPLPPSVKSTLKSYALTTSQCF-------------------NS 240
Fly 241 LTQSSKSKNRCKTPTSSSRNSCAIA 265 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Rab40 | NP_727611.1 | P-loop_NTPase | 6..265 | CDD:304359 | 163/279 (58%) |
RAB | 12..182 | CDD:197555 | 120/171 (70%) | ||
SOCS | 192..234 | CDD:295349 | 24/41 (59%) | ||
rab40c | NP_001035438.1 | Rab40 | 9..279 | CDD:133321 | 163/279 (58%) |
SOCS_Rab40 | 187..229 | CDD:239711 | 24/41 (59%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 245 | 1.000 | Domainoid score | I2144 |
eggNOG | 1 | 0.900 | - | - | E1_KOG0078 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H10907 | |
Inparanoid | 1 | 1.050 | 326 | 1.000 | Inparanoid score | I2458 |
OMA | 1 | 1.010 | - | - | QHG46774 | |
OrthoDB | 1 | 1.010 | - | - | D1065856at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0002583 | |
OrthoInspector | 1 | 1.000 | - | - | otm26588 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_107740 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR47980 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R10300 |
SonicParanoid | 1 | 1.000 | - | - | X1940 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
15 | 14.870 |