Protein Alignment Rab40 and rab40b

DIOPT Version :9

• Sequence 1: NP_727611.1
• Gene: Rab40 / 32195
• FlyBaseID: FBgn0030391
• Length: 265
• Species: Drosophila melanogaster
• Sequence 2: NP_001002524.2
• Gene: rab40b / 436797
• ZFINID: ZDB-GENE-040718-257
• Length: 287
• Species: Danio rerio
• Alignment Length: 279
• Identity: 163/279 - (58%)
• Similarity: 205/279 - (73%)
• Gaps: 27/279 - (9%)

  Fly     6 KDYDYLLKVLLVGDSDVGKHEILSNLEDPSTESPFCSGNDCTSHILQTVAYKTTTILLEGKRVKL 70
            |.||:|||.||||||||||.|||::|:|.|:|||:  |.:      ..:.||||||||:|:||||
Zfish    17 KAYDFLLKFLLVGDSDVGKGEILASLQDGSSESPY--GYN------MGIDYKTTTILLDGRRVKL 73

  Fly    71 QLWDTSGQGRFCTIIRSYSRGAQGIILVYDITNKWSFDGIDRWLKEVDEHAPGIPKVLVGNRLHL 135
            ||||||||||||||.|||||||||:||||||||:|||||||||:||:||||||:||:||||||||
Zfish    74 QLWDTSGQGRFCTIFRSYSRGAQGVILVYDITNRWSFDGIDRWIKEIDEHAPGVPKILVGNRLHL 138

  Fly   136 AFKRQVAAKQAETYASRNNMSCFEISPLCNFNIRESFCELARMALHRNGMEHIWRSNKVLSLQEL 200
            |:||||..:..:.:..|..::.||:||||||||.|||.||||:.|.|:|||.:||.|||||||:|
Zfish   139 AYKRQVTTEHTQAFVERLGVTFFEVSPLCNFNITESFTELARIVLMRHGMERLWRPNKVLSLQDL 203

  Fly   201 CCRTIVRRTSVYAIDSLPLPPSVKSTLKSYALTT---------SQCFNSLTQSSKSKNRCK---- 252
            |||:||..|.|:.:|.||||.::||.|||:::..         .:.::.:..|:|.:|..|
Zfish   204 CCRSIVSCTPVHLVDKLPLPVALKSHLKSFSMANGLVNTRMMHGRSYSVIPSSAKKRNGTKKSKI 268

  Fly   253 --TPTSSS----RNSCAIA 265
              .|.|.|    |.||.|:
Zfish   269 IYPPLSPSQHCARTSCKIS 287

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab40	NP_727611.1	P-loop_NTPase	6..265	CDD:304359	162/277 (58%)
		RAB	12..182	CDD:197555	117/169 (69%)
		SOCS	192..234	CDD:295349	25/41 (61%)
rab40b	NP_001002524.2	Rab40	17..194	CDD:133321	126/184 (68%)
		RAB	23..185	CDD:197555	117/169 (69%)
		SOCS_Rab40	195..237	CDD:239711	25/41 (61%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	245	1.000	Domainoid score	I2144
eggNOG	1	0.900	-	-		E1_KOG0078
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	326	1.000	Inparanoid score	I2458
OMA	1	1.010	-	-		QHG46774
OrthoDB	1	1.010	-	-		D1065856at2759
OrthoFinder	1	1.000	-	-		FOG0002583
OrthoInspector	1	1.000	-	-		otm26588
orthoMCL	1	0.900	-	-		OOG6_107740
Panther	1	1.100	-	-	O	PTHR47980
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X1940
SwiftOrtho	1	1.000	-	-
TreeFam	1	0.960	-	-
ZFIN	0	0.000	Not matched by this tool.
	14	13.840