Protein Alignment Rab40 and Rab11

DIOPT Version :9

• Sequence 1: NP_727611.1
• Gene: Rab40 / 32195
• FlyBaseID: FBgn0030391
• Length: 265
• Species: Drosophila melanogaster
• Sequence 2: NP_477170.1
• Gene: Rab11 / 42501
• FlyBaseID: FBgn0015790
• Length: 214
• Species: Drosophila melanogaster
• Alignment Length: 245
• Identity: 81/245 - (33%)
• Similarity: 127/245 - (51%)
• Gaps: 41/245 - (16%)

  Fly     1 MGTMTKDYDYLLKVLLVGDSDVGKHEILS-------NLEDPSTESPFCSGNDCTSHILQTVAYKT 58
            ||....:||||.||:|:|||.|||..:||       |||..||..               |.:.|
  Fly     1 MGAREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIG---------------VEFAT 50

  Fly    59 TTILLEGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGIILVYDITNKWSFDGIDRWLKEVDEHA-P 122
            .:|.::||.:|.|:|||:||.|:..|..:|.|||.|.:|||||....:::.::|||:|:.:|| .
  Fly    51 RSIEVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQ 115

  Fly   123 GIPKVLVGNRLHLAFKRQVAAKQAETYASRNNMSCFEISPLCNFNIRESFCELARMALHRNGMEH 187
            .|..:||||:..|...|.|...:|:.:|.||.:|..|.|.|.:.|:..:|         :|.:..
  Fly   116 NIVIMLVGNKSDLRHLRSVPTDEAKLFAERNGLSFIETSALDSTNVETAF---------QNILTE 171

  Fly   188 IWRSNKVLSLQELCCRTIVRRTSVYAIDSLPLPPSVKSTLKSYALTTSQC 237
            |:|......:::.....::|.::|..||   :.|:|.:.::      .||
  Fly   172 IYRIVSQKQIRDPPEGDVIRPSNVEPID---VKPTVTADVR------KQC 212

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab40	NP_727611.1	P-loop_NTPase	6..265	CDD:304359	79/240 (33%)
		RAB	12..182	CDD:197555	64/177 (36%)
		SOCS	192..234	CDD:295349	6/41 (15%)
Rab11	NP_477170.1	Rab11_like	9..173	CDD:206660	68/187 (36%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	1	0.910