Protein Alignment Rab40 and rab35

DIOPT Version :10

• Sequence 1: NP_727611.1
• Gene: Rab40 / 32195
• FlyBaseID: FBgn0030391
• Length: 265
• Species: Drosophila melanogaster
• Sequence 2: NP_989019.1
• Gene: rab35 / 394615
• XenbaseID: XB-GENE-489018
• Length: 201
• Species: Xenopus tropicalis
• Alignment Length: 211
• Identity: 72/211 - (34%)
• Similarity: 116/211 - (54%)
• Gaps: 22/211 - (10%)

  Fly     4 MTKDYDYLLKVLLVGDSDVGKHEILSNLEDPSTESPFCSGNDCTSHILQTVA--YKTTTILLEGK 66
            |.:|||:|.|:|::|||.|||..:|....|          |..:...:.|:.  :|..|:.:.|:
 Frog     1 MARDYDHLFKLLIIGDSGVGKSSLLLRFAD----------NTFSGSYITTIGVDFKIRTVEINGE 55

  Fly    67 RVKLQLWDTSGQGRFCTIIRSYSRGAQGIILVYDITNKWSFDGIDRWLKEVDEHAPGIPKVLVGN 131
            :||||:|||:||.||.||..:|.||..|:|:|||:|:..||..:.|||.|::::...:.::||||
 Frog    56 KVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNCDDVCRILVGN 120

  Fly   132 RLHLAFKRQVAAKQAETYASRNNMSCFEISPLCNFNIRESF-C--ELARMALHRN-GMEHIWRSN 192
            :.....::.|..:.|..:|::.::..||.|...|.|:.|.| |  ||...|...| ..:...:.|
 Frog   121 KNDDPERKVVETEDAYKFAAQMDIQLFETSAKENLNVEEMFNCITELVLRAKKDNLAKQQQQQQN 185

  Fly   193 KVLSL------QELCC 202
            .|:.|      ::.||
 Frog   186 DVVKLSKNSKRKKRCC 201

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab40	NP_727611.1	P-loop containing Nucleoside Triphosphate Hydrolases	6..265	CDD:476819	71/209 (34%)
		SOCS	192..234	CDD:470605	5/17 (29%)
rab35	NP_989019.1	Rab35	3..201	CDD:133310	69/207 (33%)