powered by:
Protein Alignment Rab40 and Rab8b
DIOPT Version :9
Sequence 1: | NP_727611.1 |
Gene: | Rab40 / 32195 |
FlyBaseID: | FBgn0030391 |
Length: | 265 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_038936858.1 |
Gene: | Rab8b / 266688 |
RGDID: | 628764 |
Length: | 208 |
Species: | Rattus norvegicus |
Alignment Length: | 178 |
Identity: | 76/178 - (42%) |
Similarity: | 109/178 - (61%) |
Gaps: | 14/178 - (7%) |
- Green bases have known domain annotations that are detailed below.
Fly 4 MTKDYDYLLKVLLVGDSDVGKHEILSNLEDPSTESPFCS--GNDCTSHILQTVAYKTTTILLEGK 66
|.|.||||.|:||:|||.|||..:|....:.:..:.|.| |.| :|..||.|:||
Rat 1 MAKTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGID----------FKIRTIELDGK 55
Fly 67 RVKLQLWDTSGQGRFCTIIRSYSRGA-QGIILVYDITNKWSFDGIDRWLKEVDEHAPG-IPKVLV 129
::|||:|||:||.||.||..:|.||| |||:|||||||:.|||.|..|::.::|||.. :.::::
Rat 56 KIKLQIWDTAGQERFRTITTAYYRGAMQGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMIL 120
Fly 130 GNRLHLAFKRQVAAKQAETYASRNNMSCFEISPLCNFNIRESFCELAR 177
||:..:..||||:.::.|..|....:...|.|...:.|:.|:|..|||
Rat 121 GNKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSTNVEEAFFTLAR 168
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_KOG0078 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
1 |
1.000 |
- |
- |
|
|
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
3 | 2.810 |
|
Return to query results.
Submit another query.