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Protein Alignment Rab40 and rab-8
DIOPT Version :9
Sequence 1: | NP_727611.1 |
Gene: | Rab40 / 32195 |
FlyBaseID: | FBgn0030391 |
Length: | 265 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_491199.2 |
Gene: | rab-8 / 171935 |
WormBaseID: | WBGene00004272 |
Length: | 211 |
Species: | Caenorhabditis elegans |
Alignment Length: | 177 |
Identity: | 77/177 - (43%) |
Similarity: | 106/177 - (59%) |
Gaps: | 13/177 - (7%) |
- Green bases have known domain annotations that are detailed below.
Fly 4 MTKDYDYLLKVLLVGDSDVGKHEILSNLEDPSTESPFCS--GNDCTSHILQTVAYKTTTILLEGK 66
|.|.||||.|:||:|||.|||..:|....|.|..:.|.| |.| :|..||.|:||
Worm 1 MAKTYDYLFKLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGID----------FKIRTIELDGK 55
Fly 67 RVKLQLWDTSGQGRFCTIIRSYSRGAQGIILVYDITNKWSFDGIDRWLKEVDEHAPG-IPKVLVG 130
::|||:|||:||.||.||..:|.|||.||||||||||:.||:.|..|::.::|||.. :.::::|
Worm 56 KIKLQIWDTAGQERFRTITTAYYRGAMGIILVYDITNERSFENIKNWIRNIEEHAASDVERMIIG 120
Fly 131 NRLHLAFKRQVAAKQAETYASRNNMSCFEISPLCNFNIRESFCELAR 177
|:..:..:|:|:..:.|..|........|.|...|.||.|:|..|||
Worm 121 NKCDIEERREVSRDRGEQLAIEYGTKFLETSAKANLNIDEAFFTLAR 167
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_KOG0078 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
1 |
1.000 |
- |
- |
|
|
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
3 | 2.810 |
|
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