DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pkcdelta and Prkcq

DIOPT Version :10

Sequence 1:NP_572797.3 Gene:Pkcdelta / 32191 FlyBaseID:FBgn0287828 Length:1894 Species:Drosophila melanogaster
Sequence 2:NP_001263650.1 Gene:Prkcq / 85420 RGDID:620968 Length:707 Species:Rattus norvegicus


Alignment Length:327 Identity:187/327 - (57%)
Similarity:244/327 - (74%) Gaps:4/327 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly  1563 VDDFHFLAVLGKGSFGKVLLAELRDTTYYYAIKCLKKDVVLEDDDVDSTLIERKVLALGTKHPYL 1627
            :|||....:|||||||||.|||.:.|..::|||.|||||||.||||:.|::|::||:|..:||:|
  Rat   377 IDDFILHKMLGKGSFGKVFLAEFKRTKQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFL 441

  Fly  1628 CHLFCTFQTESHLFFVMEYLNGGDLMFHIQESGRFSEERARFYGAEIISGLKFLHKKGIIYRDLK 1692
            .|:||||||:.:||||||||||||||:|||...:|...||.||.||||.||:|||.|||:|||||
  Rat   442 THMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLK 506

  Fly  1693 LDNVLLDYEGHVRIADFGMCKLQIYLDKTADSFCGTPDYMAPEIIKGEKYNQNVDWWSFGVLLYE 1757
            |||:|||.:||::||||||||..:..|...::|||||||:||||:.|:|||.:||||||||||||
  Rat   507 LDNILLDRDGHIKIADFGMCKENMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYE 571

  Fly  1758 MLIGQSPFSGCDEDELFWSICNEIPWFPVYISAEATGILKGLLEKDYTKRIGSQYSPAGDIADHI 1822
            ||||||||.|.||:|||.||..:.|::|.::..||..:|..|..::..||:|.:    |||..|.
  Rat   572 MLIGQSPFHGQDEEELFHSIRMDNPFYPRWLEREAKDLLVKLFVREPEKRLGVR----GDIRQHP 632

  Fly  1823 FFRPIDWGLLEKRQIEPPFKPQVKHPLDTQYFDRVFTRERVRLTPIDKEILASMDQKQFHGFTYT 1887
            .||.|:|..||:::|:|||:|:||.|.|...||:.|..|:.||:..|:.::.||||..|..|::.
  Rat   633 LFREINWEELERKEIDPPFRPKVKSPYDCSNFDKEFLSEKPRLSFADRALINSMDQNMFSNFSFI 697

  Fly  1888 NP 1889
            ||
  Rat   698 NP 699

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PkcdeltaNP_572797.3 Herpes_BLLF1 <802..1131 CDD:282904
STKc_nPKC_theta_like 1570..1889 CDD:270744 182/318 (57%)
PrkcqNP_001263650.1 C1_nPKC_theta-like_rpt1 153..213 CDD:410384
C1_nPKC_theta-like_rpt2 232..281 CDD:410387
STKc_nPKC_theta 374..704 CDD:270770 187/327 (57%)
Blue background indicates that the domain is not in the aligned region.

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