DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pkcdelta and Rps6kb1

DIOPT Version :10

Sequence 1:NP_572797.3 Gene:Pkcdelta / 32191 FlyBaseID:FBgn0287828 Length:1894 Species:Drosophila melanogaster
Sequence 2:XP_063126049.1 Gene:Rps6kb1 / 83840 RGDID:620683 Length:546 Species:Rattus norvegicus


Alignment Length:392 Identity:146/392 - (37%)
Similarity:213/392 - (54%) Gaps:40/392 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly  1516 NDSGFEGGTAP-------SSPKKMLETSYTYSQFQKSGRFTAPATVIPRFKNYSVDDFHFLAVLG 1573
            |:|...||..|       ....::.|||..          ..|..:.|       :.|..|.|||
  Rat    51 NESMDHGGVGPYELGMEHCEKFEISETSVN----------RGPEKIRP-------ECFELLRVLG 98

  Fly  1574 KGSFGKVLLAELR-----DTTYYYAIKCLKKDVVLED-DDVDSTLIERKVLALGTKHPYLCHLFC 1632
            ||.:|||.  ::|     :|...:|:|.|||.:::.: .|...|..||.:|. ..|||::..|..
  Rat    99 KGGYGKVF--QVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILE-EVKHPFIVDLIY 160

  Fly  1633 TFQTESHLFFVMEYLNGGDLMFHIQESGRFSEERARFYGAEIISGLKFLHKKGIIYRDLKLDNVL 1697
            .|||...|:.::|||:||:|...::..|.|.|:.|.||.|||...|..||:|||||||||.:|::
  Rat   161 AFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIM 225

  Fly  1698 LDYEGHVRIADFGMCKLQIYLDKTADSFCGTPDYMAPEIIKGEKYNQNVDWWSFGVLLYEMLIGQ 1762
            |:::|||::.|||:||..|:......:||||.:||||||:....:|:.|||||.|.|:|:||.|.
  Rat   226 LNHQGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGA 290

  Fly  1763 SPFSGCDEDELFWSICNEIPWFPVYISAEATGILKGLLEKDYTKRIGSQYSPAGDIADHIFFRPI 1827
            .||:|.:..:....|.......|.|::.||..:||.||:::...|:|:....||::..|.|||.|
  Rat   291 PPFTGENRKKTIDKILKCKLNLPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFRHI 355

  Fly  1828 DWGLLEKRQIEPPFKPQVKHPLDTQYFDRVFTRERVRLTPIDK---EILASMDQKQFHGFTYTNP 1889
            :|..|..|::||||||.::...|...||..|||:    ||:|.   ..|:....:.|.||||..|
  Rat   356 NWEELLARKVEPPFKPLLQSEEDVSQFDSKFTRQ----TPVDSPDDSTLSESANQVFLGFTYVAP 416

  Fly  1890 HI 1891
            .:
  Rat   417 SV 418

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PkcdeltaNP_572797.3 Herpes_BLLF1 <802..1131 CDD:282904
STKc_nPKC_theta_like 1570..1889 CDD:270744 133/327 (41%)
Rps6kb1XP_063126049.1 None
Blue background indicates that the domain is not in the aligned region.

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