DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pkcdelta and AT5G40030

DIOPT Version :9

Sequence 1:NP_572797.3 Gene:Pkcdelta / 32191 FlyBaseID:FBgn0259680 Length:1894 Species:Drosophila melanogaster
Sequence 2:NP_198819.1 Gene:AT5G40030 / 834000 AraportID:AT5G40030 Length:499 Species:Arabidopsis thaliana


Alignment Length:511 Identity:144/511 - (28%)
Similarity:234/511 - (45%) Gaps:132/511 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly  1469 NATTVLDSSNSSGSNAGTLSVPSAGSGSGGGASTSSSP----SIIRMSTCS-------------- 1515
            |..::.|.|:|:.:||.  :.|.:||.|...:|..|..    :.|.:|.||              
plant     7 NLESLQDCSSSNYNNAN--ASPVSGSASFKTSSNGSEDVRLNNSISLSFCSSNSVSSEANLEKTQ 69

  Fly  1516 ----NDSGFEGGTAPSSPKKMLETSYTYSQFQKSGRFTAPATVIPRFKNYSVDDFHFLAVLGKGS 1576
                |::.|:...|||.|.|..:..:...|..|..          :.::..:..|..|..||.|.
plant    70 SFDANEANFKRVFAPSKPHKGNDLRWDAIQNVKCS----------KNEDLGLGHFRLLKKLGCGD 124

  Fly  1577 FGKVLLAELRDTTYYYAIKCLKKDVVLEDDDVDSTLIERKVLALGTKHPYLCHLFCTFQTESHLF 1641
            .|.|.|||||:...::|:|.:.|.:::....:.....||::|.| ..||:|..|:..|:||....
plant   125 IGSVYLAELREMGCFFAMKVMDKGMLIGRKKLVRAQTEREILGL-LDHPFLPTLYSHFETEKFSC 188

  Fly  1642 FVMEYLNGGDLMFHI----QESGRFSEERARFYGAEIISGLKFLHKKGIIYRDLKLDNVLLDYEG 1702
            .:||:.:||||  ||    |....|||..||||.:|::..|::||..|::|||||.:||::..:|
plant   189 LLMEFCSGGDL--HILRQKQPGKHFSELAARFYASEVLLALEYLHMMGVVYRDLKPENVMVREDG 251

  Fly  1703 HVRIADFGM----------------------------------CKLQI-----------YLD--- 1719
            |:.::||.:                                  |||.:           :|:   
plant   252 HIMLSDFDLSLQSFVSPTLIQSTSQPSCHIASYCIQPPCIDPSCKLPVACIQPSCFKPRFLNNKP 316

  Fly  1720 ---KT-------------------ADSFCGTPDYMAPEIIKGEKYNQNVDWWSFGVLLYEMLIGQ 1762
               ||                   :.||.||.:|:|||||:|:.:..:||||:||:.|||:|.|:
plant   317 RKAKTEKAGSDSLPMLIAEPTAARSMSFVGTHEYLAPEIIRGDGHGSSVDWWTFGIFLYELLTGK 381

  Fly  1763 SPFSGCDEDELFWSICNEIPWFPV-YISAEATGILKGLLEKDYTKRIGSQYSPAGDIADHIFFRP 1826
            :||.|....|..:::..:...||. .||..|..:::|||.||..||:|.: ..|.:|..|.||..
plant   382 TPFKGNGNRETLFNVVGQPLKFPEGSISFAAKDLIRGLLTKDPKKRLGFK-KGATEIKQHPFFNN 445

  Fly  1827 IDWGLLEKRQIEPPFKPQVKHPLDTQYFDRVFTRERVRLTPIDKEILASMDQKQFH 1882
            ::|.|:  |...|   |::..|:|              |:.:::.:.:|:.|:..|
plant   446 VNWALI--RSTTP---PEIPKPID--------------LSILNETLKSSVQQQGKH 482

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PkcdeltaNP_572797.3 S_TKc 1566..1824 CDD:214567 106/332 (32%)
STKc_nPKC_theta_like 1570..1889 CDD:270744 117/388 (30%)
AT5G40030NP_198819.1 STKc_phototropin_like 113..464 CDD:270726 114/359 (32%)
Keratin_B2_2 276..>309 CDD:372783 3/32 (9%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 206 1.000 Inparanoid score I1276
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.960

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