DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pkcdelta and AT5G40030

DIOPT Version :10

Sequence 1:NP_572797.3 Gene:Pkcdelta / 32191 FlyBaseID:FBgn0287828 Length:1894 Species:Drosophila melanogaster
Sequence 2:NP_198819.1 Gene:AT5G40030 / 834000 AraportID:AT5G40030 Length:499 Species:Arabidopsis thaliana


Alignment Length:511 Identity:144/511 - (28%)
Similarity:234/511 - (45%) Gaps:132/511 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly  1469 NATTVLDSSNSSGSNAGTLSVPSAGSGSGGGASTSSSP----SIIRMSTCS-------------- 1515
            |..::.|.|:|:.:||.  :.|.:||.|...:|..|..    :.|.:|.||              
plant     7 NLESLQDCSSSNYNNAN--ASPVSGSASFKTSSNGSEDVRLNNSISLSFCSSNSVSSEANLEKTQ 69

  Fly  1516 ----NDSGFEGGTAPSSPKKMLETSYTYSQFQKSGRFTAPATVIPRFKNYSVDDFHFLAVLGKGS 1576
                |::.|:...|||.|.|..:..:...|..|..          :.::..:..|..|..||.|.
plant    70 SFDANEANFKRVFAPSKPHKGNDLRWDAIQNVKCS----------KNEDLGLGHFRLLKKLGCGD 124

  Fly  1577 FGKVLLAELRDTTYYYAIKCLKKDVVLEDDDVDSTLIERKVLALGTKHPYLCHLFCTFQTESHLF 1641
            .|.|.|||||:...::|:|.:.|.:::....:.....||::|.| ..||:|..|:..|:||....
plant   125 IGSVYLAELREMGCFFAMKVMDKGMLIGRKKLVRAQTEREILGL-LDHPFLPTLYSHFETEKFSC 188

  Fly  1642 FVMEYLNGGDLMFHI----QESGRFSEERARFYGAEIISGLKFLHKKGIIYRDLKLDNVLLDYEG 1702
            .:||:.:||||  ||    |....|||..||||.:|::..|::||..|::|||||.:||::..:|
plant   189 LLMEFCSGGDL--HILRQKQPGKHFSELAARFYASEVLLALEYLHMMGVVYRDLKPENVMVREDG 251

  Fly  1703 HVRIADFGM----------------------------------CKLQI-----------YLD--- 1719
            |:.::||.:                                  |||.:           :|:   
plant   252 HIMLSDFDLSLQSFVSPTLIQSTSQPSCHIASYCIQPPCIDPSCKLPVACIQPSCFKPRFLNNKP 316

  Fly  1720 ---KT-------------------ADSFCGTPDYMAPEIIKGEKYNQNVDWWSFGVLLYEMLIGQ 1762
               ||                   :.||.||.:|:|||||:|:.:..:||||:||:.|||:|.|:
plant   317 RKAKTEKAGSDSLPMLIAEPTAARSMSFVGTHEYLAPEIIRGDGHGSSVDWWTFGIFLYELLTGK 381

  Fly  1763 SPFSGCDEDELFWSICNEIPWFPV-YISAEATGILKGLLEKDYTKRIGSQYSPAGDIADHIFFRP 1826
            :||.|....|..:::..:...||. .||..|..:::|||.||..||:|.: ..|.:|..|.||..
plant   382 TPFKGNGNRETLFNVVGQPLKFPEGSISFAAKDLIRGLLTKDPKKRLGFK-KGATEIKQHPFFNN 445

  Fly  1827 IDWGLLEKRQIEPPFKPQVKHPLDTQYFDRVFTRERVRLTPIDKEILASMDQKQFH 1882
            ::|.|:  |...|   |::..|:|              |:.:::.:.:|:.|:..|
plant   446 VNWALI--RSTTP---PEIPKPID--------------LSILNETLKSSVQQQGKH 482

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PkcdeltaNP_572797.3 Herpes_BLLF1 <802..1131 CDD:282904
STKc_nPKC_theta_like 1570..1889 CDD:270744 117/388 (30%)
AT5G40030NP_198819.1 STKc_phototropin_like 113..464 CDD:270726 114/359 (32%)
Keratin_B2_2 267..309 CDD:464017 3/41 (7%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.