DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pkcdelta and prkcd

DIOPT Version :9

Sequence 1:NP_572797.3 Gene:Pkcdelta / 32191 FlyBaseID:FBgn0259680 Length:1894 Species:Drosophila melanogaster
Sequence 2:XP_002934267.1 Gene:prkcd / 733756 XenbaseID:XB-GENE-478663 Length:683 Species:Xenopus tropicalis


Alignment Length:386 Identity:212/386 - (54%)
Similarity:277/386 - (71%) Gaps:10/386 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly  1509 IRMSTCSNDSGFEG-----GTAPSSPKKMLETSYTYSQFQKSGRFTAPATVIPRFKNYSVDDFHF 1568
            ::.|:..:|||.:.     |..|.:|...:..: |.:|:.:....::|...|.......:|:|.|
 Frog   295 MKSSSRKSDSGLDNIAIYQGVNPKTPGLPMPDA-TDNQYDRLWEGSSPHPHISLSSRLKIDNFVF 358

  Fly  1569 LAVLGKGSFGKVLLAELRDTTYYYAIKCLKKDVVLEDDDVDSTLIERKVLALGTKHPYLCHLFCT 1633
            ..|||||||||||||||:....|:|||.|||||||.||||:.|::|::||||..::|:|.|::|:
 Frog   359 HKVLGKGSFGKVLLAELKGKGEYFAIKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHIYCS 423

  Fly  1634 FQTESHLFFVMEYLNGGDLMFHIQESGRFSEERARFYGAEIISGLKFLHKKGIIYRDLKLDNVLL 1698
            |||:.|||||||:|||||||||||:.|||...||.||.:|||.||:|||.|||||||||||||:|
 Frog   424 FQTKEHLFFVMEFLNGGDLMFHIQDKGRFDLYRATFYASEIICGLQFLHSKGIIYRDLKLDNVML 488

  Fly  1699 DYEGHVRIADFGMCKLQIYLDKTADSFCGTPDYMAPEIIKGEKYNQNVDWWSFGVLLYEMLIGQS 1763
            |.:||::||||||||..:|.|..|.:|||||||:||||::|.||..:||||||||||||||||||
 Frog   489 DKDGHIKIADFGMCKENVYGDNKASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQS 553

  Fly  1764 PFSGCDEDELFWSICNEIPWFPVYISAEATGILKGLLEKDYTKRIGSQYSPAGDIADHIFFRPID 1828
            ||.|.||||||.||..:.|.:|.:|:.|:..||:.|.|::.|||:|    ..|:|..|.||:.|:
 Frog   554 PFHGDDEDELFESIRQDTPHYPRWITKESKDILERLFEREPTKRLG----VVGNIKVHPFFKTIN 614

  Fly  1829 WGLLEKRQIEPPFKPQVKHPLDTQYFDRVFTRERVRLTPIDKEILASMDQKQFHGFTYTNP 1889
            |..||:|::||||||:||.|.|...|||.|..|:.||:..||.::.||||..||||::.||
 Frog   615 WTALERRELEPPFKPKVKSPSDYSNFDREFLSEKPRLSFSDKNLIDSMDQSAFHGFSFINP 675

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PkcdeltaNP_572797.3 S_TKc 1566..1824 CDD:214567 164/257 (64%)
STKc_nPKC_theta_like 1570..1889 CDD:270744 196/318 (62%)
prkcdXP_002934267.1 C1_1 158..207 CDD:365894
C1_1 230..280 CDD:365894
STKc_nPKC_delta 360..675 CDD:173710 196/318 (62%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 336 1.000 Domainoid score I1125
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H55963
Inparanoid 1 1.050 609 1.000 Inparanoid score I910
OMA 1 1.010 - - QHG45425
OrthoDB 1 1.010 - - D222529at2759
OrthoFinder 1 1.000 - - FOG0000117
OrthoInspector 1 1.000 - - otm47618
Panther 1 1.100 - - LDO PTHR24356
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R891
SonicParanoid 1 1.000 - - X125
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1212.110

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