DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pkcdelta and prkchb

DIOPT Version :10

Sequence 1:NP_572797.3 Gene:Pkcdelta / 32191 FlyBaseID:FBgn0287828 Length:1894 Species:Drosophila melanogaster
Sequence 2:NP_001038271.1 Gene:prkchb / 556591 ZFINID:ZDB-GENE-041001-104 Length:676 Species:Danio rerio


Alignment Length:331 Identity:174/331 - (52%)
Similarity:226/331 - (68%) Gaps:3/331 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly  1563 VDDFHFLAVLGKGSFGKVLLAELRDTTYYYAIKCLKKDVVLEDDDVDSTLIERKVLALGTKHPYL 1627
            ::||.||.||||||||||:||.|:.....:|:|.|||||:|::|||::|:.|::||.|..:||:|
Zfish   344 LEDFSFLQVLGKGSFGKVMLARLKSDHRVFAVKMLKKDVILQEDDVEATMTEKRVLTLAHQHPFL 408

  Fly  1628 CHLFCTFQTESHLFFVMEYLNGGDLMFHIQESGRFSEERARFYGAEIISGLKFLHKKGIIYRDLK 1692
            ..|:..|||...||||||::||||||||||:..||.|.||:||.||:.|.|||||.|||||||||
Zfish   409 TQLYYCFQTTERLFFVMEFVNGGDLMFHIQKCRRFDEPRAQFYAAEVTSALKFLHSKGIIYRDLK 473

  Fly  1693 LDNVLLDYEGHVRIADFGMCKLQIYLDKTADSFCGTPDYMAPEIIKGEKYNQNVDWWSFGVLLYE 1757
            |||:|||.:||.::|||||||.:|:..|...:|||||||:||||::.|.|..:||||:.||||||
Zfish   474 LDNILLDRDGHCKLADFGMCKEEIFNGKLTSTFCGTPDYIAPEILQEELYGVSVDWWALGVLLYE 538

  Fly  1758 MLIGQSPFSGCDEDELFWSICNEIPWFPVYISAEATGILKGLLEKDYTKRIGSQYSPAGD--IAD 1820
            ||.|.:||....|||||..|..:...:..::|.||..||||||.:|...|:|...:..|:  |..
Zfish   539 MLSGHAPFEAETEDELFECILKDEIIYSSWLSYEAEDILKGLLTRDPACRLGCIDNDGGEEAITA 603

  Fly  1821 HIFFRPIDWGLLEKRQIEPPFKPQVKHPLDTQYFDRVFTRERVRLTPIDKEILASMDQKQFHGFT 1885
            |.||..:||..|.:|:|.|||.|::....|...||..||:|...||||: |.|....|..|..|:
Zfish   604 HAFFTGLDWEKLYRREITPPFTPRINSIEDVNNFDPDFTQEDPCLTPIE-ESLFPFHQDGFKDFS 667

  Fly  1886 YTNPHI 1891
            |..|.:
Zfish   668 YIAPEL 673

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PkcdeltaNP_572797.3 Herpes_BLLF1 <802..1131 CDD:282904
STKc_nPKC_theta_like 1570..1889 CDD:270744 169/320 (53%)
prkchbNP_001038271.1 C2_PKC_epsilon 3..133 CDD:175981
C1_nPKC_epsilon-like_rpt1 156..219 CDD:410385
C1_nPKC_epsilon-like_rpt2 234..288 CDD:410388
Protein Kinases, catalytic domain 351..673 CDD:473864 170/322 (53%)
Blue background indicates that the domain is not in the aligned region.

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