DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pkcdelta and Pka-C2

DIOPT Version :10

Sequence 1:NP_572797.3 Gene:Pkcdelta / 32191 FlyBaseID:FBgn0287828 Length:1894 Species:Drosophila melanogaster
Sequence 2:NP_733397.2 Gene:Pka-C2 / 43644 FlyBaseID:FBgn0000274 Length:354 Species:Drosophila melanogaster


Alignment Length:305 Identity:97/305 - (31%)
Similarity:181/305 - (59%) Gaps:6/305 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly  1562 SVDDFHFLAVLGKGSFGKVLLAELRDTTYYYAIKCLKKDVVLEDDDVDSTLIERKVLALGTKHPY 1626
            :::::...||||.||||.|:|...:....|||.|.:.|:.::....|.....|:.||. ..:.|:
  Fly    41 NLENYITRAVLGNGSFGTVMLVREKSGKNYYAAKMMSKEDLVRLKQVAHVHNEKHVLN-AARFPF 104

  Fly  1627 LCHLFCTFQTESHLFFVMEYLNGGDLMFHIQESGRFSEERARFYGAEIISGLKFLHKKGIIYRDL 1691
            |.:|..:.:...:|:.::..:|||:|..:.:...:|:|:.||||.|::...|:::||..::||||
  Fly   105 LIYLVDSTKCFDYLYLILPLVNGGELFSYHRRVRKFNEKHARFYAAQVALALEYMHKMHLMYRDL 169

  Fly  1692 KLDNVLLDYEGHVRIADFGMCKLQIYLDKTADSFCGTPDYMAPEIIKGEKYNQNVDWWSFGVLLY 1756
            |.:|:|||..|:::|.|||..|   .:|....:.||||:|:||||::...||::||||:||:|:|
  Fly   170 KPENILLDQRGYIKITDFGFTK---RVDGRTSTLCGTPEYLAPEIVQLRPYNKSVDWWAFGILVY 231

  Fly  1757 EMLIGQSPFSGCDEDE--LFWSICNEIPWFPVYISAEATGILKGLLEKDYTKRIGSQYSPAGDIA 1819
            |.:.|:|||:..:.|.  ::..||......|.|.:::...:::.|::.|.:||:|:....:.|:.
  Fly   232 EFVAGRSPFAIHNRDVILMYSKICICDYKMPSYFTSQLRSLVESLMQVDTSKRLGNSNDGSSDVK 296

  Fly  1820 DHIFFRPIDWGLLEKRQIEPPFKPQVKHPLDTQYFDRVFTRERVR 1864
            .|.:|:.:||..:..:::..|::|.:....|...|:....::|.:
  Fly   297 SHPWFQGVDWFGILNQEVTAPYQPTISGAEDLSNFENFEFKDRYK 341

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PkcdeltaNP_572797.3 Herpes_BLLF1 <802..1131 CDD:282904
STKc_nPKC_theta_like 1570..1889 CDD:270744 97/297 (33%)
Pka-C2NP_733397.2 Protein Kinases, catalytic domain 43..334 CDD:473864 96/294 (33%)
Blue background indicates that the domain is not in the aligned region.

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