DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pkcdelta and prkcbb

DIOPT Version :9

Sequence 1:NP_572797.3 Gene:Pkcdelta / 32191 FlyBaseID:FBgn0259680 Length:1894 Species:Drosophila melanogaster
Sequence 2:NP_957272.1 Gene:prkcbb / 393953 ZFINID:ZDB-GENE-040426-1178 Length:670 Species:Danio rerio


Alignment Length:558 Identity:224/558 - (40%)
Similarity:294/558 - (52%) Gaps:51/558 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly  1334 DYSSVDGCANLSASMKKKLRKEKKKQKAKAAAAAEAKRFDPHKKIKIDTTNKCYVKEEAPRYPLV 1398
            |::...|...::|.:|..:.....|:.............||:.|:|:....|...|::..  .:.
Zfish   153 DHTERRGRIQITAEIKNNVLTVSIKEAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTK--TIK 215

  Fly  1399 ATPRPLWKREKIVYSDENTDDESGSEEGSGGSLDEDSDDESGGEECSSTSSSASSEDLDAVAMVT 1463
            ....|.|.........|:..|...|.|      ..|.|..|..:...|.|...|.        :.
Zfish   216 CCLNPTWNETFTFNLKESDKDRRLSVE------IWDWDLTSRNDFMGSLSFGISE--------LQ 266

  Fly  1464 KAGSSNATTVLDSSNSSGSNAGTLSVPSAGSGSGGGASTSSSPSIIRMSTCSNDSGFEGGTAPSS 1528
            |.|......:|........|     ||....|..|...........::.....|.          
Zfish   267 KQGVDGWFKLLSQEEGEYFN-----VPVPPEGEEGNEELRQKFERAKIGPSKTDG---------- 316

  Fly  1529 PKKMLETSYTYSQFQKSGRFTAPATVIPRFKNYSVDDFHFLAVLGKGSFGKVLLAELRDTTYYYA 1593
                 .:|...|:|..:|.       ..|.|   :.||:||.||||||||||:|||.:.....:|
Zfish   317 -----SSSNAISKFDSNGN-------RDRMK---LSDFNFLMVLGKGSFGKVMLAERKGADELFA 366

  Fly  1594 IKCLKKDVVLEDDDVDSTLIERKVLALGTKHPYLCHLFCTFQTESHLFFVMEYLNGGDLMFHIQE 1658
            ||.||||||::||||:.|::|::||||..|.|:|..|...|||...|:|||||:||||||:|||:
Zfish   367 IKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVMEYINGGDLMYHIQQ 431

  Fly  1659 SGRFSEERARFYGAEIISGLKFLHKKGIIYRDLKLDNVLLDYEGHVRIADFGMCKLQIYLDKTAD 1723
            .|:|.|..|.||.|||..||.|||.||:||||||||||:||.|||::||||||||..:....|..
Zfish   432 VGKFKEPHAVFYAAEIAIGLFFLHSKGVIYRDLKLDNVMLDAEGHIKIADFGMCKENMLDGVTTK 496

  Fly  1724 SFCGTPDYMAPEIIKGEKYNQNVDWWSFGVLLYEMLIGQSPFSGCDEDELFWSICNEIPWFPVYI 1788
            :|||||||:|||||..:.|.::||||:|||||||||.||.||.|.||||||.||......:|..:
Zfish   497 TFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSIMEHHVSYPKSM 561

  Fly  1789 SAEATGILKGLLEKDYTKRIGSQYSPAG--DIADHIFFRPIDWGLLEKRQIEPPFKPQVKHPLDT 1851
            |.||..|.|||:.|...||:|.  .|.|  ||.:|.|||.:||..||.|:::|||||:. ...|.
Zfish   562 SKEAVAICKGLMTKHPGKRLGC--GPEGERDIREHGFFRYMDWEKLEHREVQPPFKPKA-CGRDA 623

  Fly  1852 QYFDRVFTRERVRLTPIDKEILASMDQKQFHGFTYTNP 1889
            :.|||.|||....|||.|:|::.::||.:|.||::.||
Zfish   624 ENFDRFFTRHPPVLTPPDQEVIMNLDQDEFEGFSFINP 661

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PkcdeltaNP_572797.3 S_TKc 1566..1824 CDD:214567 153/259 (59%)
STKc_nPKC_theta_like 1570..1889 CDD:270744 180/320 (56%)
prkcbbNP_957272.1 C1_1 36..88 CDD:278556
C1_1 101..151 CDD:278556
C2_PKC_alpha_gamma 158..288 CDD:175992 26/150 (17%)
STKc_cPKC_beta 338..660 CDD:270767 184/324 (57%)
S_TKc 339..597 CDD:214567 153/259 (59%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170583327
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D143719at33208
OrthoFinder 1 1.000 - - FOG0000117
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R891
SonicParanoid 1 1.000 - - X125
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
76.880

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